This is a project to consume HQMF XML Files and produce json

Environment

This project currently uses Ruby 1.9.2 and is built using Bundler. To get all of the dependencies for the project, first install bundler:

gem install bundler

Then run bundler to grab all of the necessary gems:

bundle install

Project Practices

Please try to follow our Coding Style Guides. Additionally, we will be using git in a pattern similar to Vincent Driessen's workflow. While feature branches are encouraged, they are not required to work on the project.

License

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

Data Mappings

PATIENT API FUNCTIONS allProblems => conditions, socialHistories, procedures encounters => encounters allProcedures => procedures, immunizations, medications procedureResults => results, vitalSigns, procedures allergies => allergies allMedications => medications, immunizations laboratoryTests => results, vitalSigns careGoals => careGoals procedures => procedures allDevices => conditions, procedures, careGoals, medicalEquipment

CATEGORIES characteristic encounters procedures conditions diagnostic_studies medications physical_exams laboratory_tests care_goals communications devices substances interventions symptoms functional_statuses risk_category_assessments provider_care_experiences patient_care_experiences preferences system_characteristics provider_characteristics transfers

SUB CATEGORIES BY CATEGORY characteristic birthdate age marital_status languages clinical_trial_participant gender ethnicity expired payer race procedures result adverse_event intolerance conditions family_history risk_of diagnostic_studies result adverse_event intolerance medications adverse_effects allergy intolerance laboratory_tests adverse_event intolerance communications from_patient_to_provider from_provider_to_patient from_provider_to_provider devices adverse_event allergy intolerance substances adverse_event intolerance allergy interventions adverse_event intolerance result functional_statuses result preferences provider patient system_characteristics provider_characteristics transfers from to

STATUSES active, performed, ordered, recommended, resolved, inactive, dispensed, administered, applied, assessed, final report

STATUSES BY CATEGORY

encounters active performed ordered recommended procedures performed ordered recommended final report conditions active resolved inactive diagnostic_studies performed ordered final report medications dispensed ordered active administered physical_exams ordered performed recommended laboratory_tests performed ordered recommended devices applied ordered recommended substances administered ordered recommended interventions ordered performed recommended symptoms active assessed inactive resolved functional_statuses performed ordered recommended

STAGE 2 Data Criteria communication_from_patient_to_provider communication_from_provider_to_provider device_applied diagnosis_active diagnosis_family_history diagnosis_inactive diagnosis_resolved diagnostic_study_ordered diagnostic_study_performed diagnostic_study_result encounter_active encounter_ordered encounter_performed functional_status_result intervention_ordered intervention_performed intervention_result laboratory_test laboratory_test_ordered laboratory_test_performed MeasurePeriod medication_active medication_administered medication_allergy medication_dispensed medication_intolerance medication_ordered patient_characteristic patient_characteristic_birthdate patient_characteristic_clinical_trial_participant patient_characteristic_expired patient_characteristic_gender physical_exam physical_exam_performed procedure_intolerance procedure_ordered procedure_performed procedure_result risk_category_assessment

STAGE 2 Definitions communication_from_patient_to_provider communication_from_provider_to_provider device diagnosis diagnosis_family_history diagnostic_study diagnostic_study_result encounter functional_status_result intervention intervention_result laboratory_test medication medication_allergy medication_intolerance patient_characteristic patient_characteristic_birthdate patient_characteristic_clinical_trial_participant patient_characteristic_expired patient_characteristic_gender physical_exam procedure_intolerance procedure procedure_result risk_category_assessment

CHARACTERISTIC

2.16.840.1.113883.3.560.1.1001 patient_characteristic allProblems 2.16.840.1.113883.3.560.1.25 patient_characteristic_birthdate birthtime 2.16.840.1.113883.3.560.1.400 patient_characteristic_birthdate birthtime 2.16.840.1.113883.3.560.1.401 patient_characteristic_clinical_trial_participant clinical_trial_participant 2.16.840.1.113883.3.560.1.402 patient_characteristic_gender gender 2.16.840.1.113883.3.560.1.403 patient_characteristic_ethnicity ethnicity 2.16.840.1.113883.3.560.1.404 patient_characteristic_expired expired 2.16.840.1.113883.3.560.1.405 patient_characteristic_payer payer 2.16.840.1.113883.3.560.1.406 patient_characteristic_race race

ENCOUNTERS

2.16.840.1.113883.3.560.1.4 encounter encounters 2.16.840.1.113883.3.560.1.81 encounter_active encounters 2.16.840.1.113883.3.560.1.79 encounter_performed encounters 2.16.840.1.113883.3.560.1.82 encounter_performed encounters 2.16.840.1.113883.3.560.1.83 encounter_ordered encounters 2.16.840.1.113883.3.560.1.84 encounter_recommended encounters 2.16.840.1.113883.3.560.1.179 encounter_performed encounters negation=true 2.16.840.1.113883.3.560.1.182 encounter_performed encounters NEGATION 2.16.840.1.113883.3.560.1.181 encounter_active encounters NEGATION 2.16.840.1.113883.3.560.1.183 encounter_ordered encounters NEGATION 2.16.840.1.113883.3.560.1.184 encounter_recommended encounters NEGATION 2.16.840.1.113883.3.560.1.104 encounter encounters NEGATION

PROCEDURES

2.16.840.1.113883.3.560.1.6 procedure_performed allProcedures 2.16.840.1.113883.3.560.1.62 procedure_ordered allProcedures 2.16.840.1.113883.3.560.1.63 procedure_result procedureResults 2.16.840.1.113883.3.560.1.60 procedure_adverse_event allergies 2.16.840.1.113883.3.560.1.61 procedure_intolerance allergies 2.16.840.1.113883.3.560.1.92 procedure_recommended allProcedures 2.16.840.1.113883.3.560.1.162 procedure_ordered allProcedures NEGATION 2.16.840.1.113883.3.560.1.163 procedure_result procedureResults NEGATION 2.16.840.1.113883.3.560.1.160 procedure_adverse_event allergies NEGATION 2.16.840.1.113883.3.560.1.161 procedure_intolerance allergies NEGATION 2.16.840.1.113883.3.560.1.106 procedure_performed allProcedures NEGATION 2.16.840.1.113883.3.560.1.192 procedure_recommended allProcedures NEGATION

CONDITIONS

2.16.840.1.113883.3.560.1.2 diagnosis_active allProblems 2.16.840.1.113883.3.560.1.24 diagnosis_resolved allProblems 2.16.840.1.113883.3.560.1.32 diagnosis_family_history N/A 2.16.840.1.113883.3.560.1.23 diagnosis_inactive allProblems 2.16.840.1.113883.3.560.1.33 diagnosis_risk_of N/A 2.16.840.1.113883.3.560.1.124 diagnosis_resolved allProblems NEGATION 2.16.840.1.113883.3.560.1.132 diagnosis_family_history N/A NEGATION 2.16.840.1.113883.3.560.1.123 diagnosis_inactive allProblems NEGATION 2.16.840.1.113883.3.560.1.102 diagnosis_active allProblems NEGATION 2.16.840.1.113883.3.560.1.133 diagnosis_risk_of N/A NEGATION

DIAGNOSTIC STUDIES

2.16.840.1.113883.3.560.1.3 diagnostic_study_performed allProcedures 2.16.840.1.113883.3.560.1.11 diagnostic_study_result procedureResults 2.16.840.1.113883.3.560.1.38 diagnostic_study_adverse_event allergies 2.16.840.1.113883.3.560.1.39 diagnostic_study_intolerance allergies 2.16.840.1.113883.3.560.1.40 diagnostic_study_ordered allProcedures 2.16.840.1.113883.3.560.1.103 diagnostic_study_performed allProcedures NEGATION 2.16.840.1.113883.3.560.1.138 diagnostic_study_adverse_event allergies NEGATION 2.16.840.1.113883.3.560.1.139 diagnostic_study_intolerance allergies NEGATION 2.16.840.1.113883.3.560.1.140 diagnostic_study_ordered allProcedures NEGATION 2.16.840.1.113883.3.560.1.111 diagnostic_study_result procedureResults NEGATION

MEDICATIONS

2.16.840.1.113883.3.560.1.8 medication_dispensed allMedications 2.16.840.1.113883.3.560.1.17 medication_ordered allMedications 2.16.840.1.113883.3.560.1.13 medication_active allMedications 2.16.840.1.113883.3.560.1.14 medication_administered allMedications 2.16.840.1.113883.3.560.1.7 medication_adverse_effects allergies 2.16.840.1.113883.3.560.1.1 medication_allergy allergies 2.16.840.1.113883.3.560.1.15 medication_intolerance allergies 2.16.840.1.113883.3.560.1.77 medication allMedications NEGATION 2.16.840.1.113883.3.560.1.78 medication_ordered allMedications NEGATION 2.16.840.1.113883.3.560.1.108 medication_dispensed allMedications NEGATION 2.16.840.1.113883.3.560.1.113 medication_active allMedications NEGATION 2.16.840.1.113883.3.560.1.107 medication_adverse_effects allergies NEGATION 2.16.840.1.113883.3.560.1.101 medication_allergy allergies NEGATION 2.16.840.1.113883.3.560.1.115 medication_intolerance allergies NEGATION 2.16.840.1.113883.3.560.1.114 medication_administered allMedications NEGATION

PHYSICAL EXAMS

2.16.840.1.113883.3.560.1.19 physical_exam procedureResults 2.16.840.1.113883.3.560.1.18 physical_exam procedureResults 2.16.840.1.113883.3.560.1.56 physical_exam_ordered procedureResults 2.16.840.1.113883.3.560.1.57 physical_exam_performed procedureResults 2.16.840.1.113883.3.560.1.91 physical_exam_recommended procedureResults 2.16.840.1.113883.3.560.1.156 physical_exam_ordered procedureResults NEGATION 2.16.840.1.113883.3.560.1.157 physical_exam_performed procedureResults NEGATION 2.16.840.1.113883.3.560.1.191 physical_exam_recommended procedureResults NEGATION 2.16.840.1.113883.3.560.1.118 physical_exam procedureResults NEGATION

LABORATORY TESTS

2.16.840.1.113883.3.560.1.12 laboratory_test laboratoryTests 2.16.840.1.113883.3.560.1.5 laboratory_test_performed laboratoryTests 2.16.840.1.113883.3.560.1.48 laboratory_test_adverse_event allergies 2.16.840.1.113883.3.560.1.49 laboratory_test_intolerance allergies 2.16.840.1.113883.3.560.1.50 laboratory_test_ordered laboratoryTests 2.16.840.1.113883.3.560.1.90 laboratory_test_recommended laboratoryTests 2.16.840.1.113883.3.560.1.112 laboratory_test laboratoryTests NEGATION 2.16.840.1.113883.3.560.1.148 laboratory_test_adverse_event allergies NEGATION 2.16.840.1.113883.3.560.1.149 laboratory_test_intolerance allergies NEGATION 2.16.840.1.113883.3.560.1.150 laboratory_test_ordered laboratoryTests NEGATION 2.16.840.1.113883.3.560.1.190 laboratory_test_recommended laboratoryTests NEGATION 2.16.840.1.113883.3.560.1.105 laboratory_test_performed laboratoryTests NEGATION

CARE GOALS

2.16.840.1.113883.3.560.1.9 care_goal careGoals 2.16.840.1.113883.3.560.1.109 care_goal careGoals NEGATION

COMMUNICATIONS

2.16.840.1.113883.3.560.1.30 communication_from_patient_to_provider procedures 2.16.840.1.113883.3.560.1.31 communication_from_provider_to_patient procedures 2.16.840.1.113883.3.560.1.29 communication_from_provider_to_provider procedures 2.16.840.1.113883.3.560.1.130 communication_from_patient_to_provider procedures NEGATION 2.16.840.1.113883.3.560.1.131 communication_from_provider_to_patient procedures NEGATION 2.16.840.1.113883.3.560.1.129 communication_from_provider_to_provider procedures NEGATION

DEVICES

2.16.840.1.113883.3.560.1.10 device_applied allDevices 2.16.840.1.113883.3.560.1.34 device_adverse_event allergies 2.16.840.1.113883.3.560.1.35 device_allergy allergies 2.16.840.1.113883.3.560.1.36 device_intolerance allergies 2.16.840.1.113883.3.560.1.37 device_ordered allDevices 2.16.840.1.113883.3.560.1.80 device_recommended allDevices 2.16.840.1.113883.3.560.1.134 device_adverse_event allergies NEGATION 2.16.840.1.113883.3.560.1.135 device_allergy allergies NEGATION 2.16.840.1.113883.3.560.1.136 device_intolerance allergies NEGATION 2.16.840.1.113883.3.560.1.137 device_ordered allDevices NEGATION 2.16.840.1.113883.3.560.1.180 device_recommended allDevices NEGATION 2.16.840.1.113883.3.560.1.110 device_applied allDevices NEGATION

SUBSTANCES

2.16.840.1.113883.3.560.1.64 substance_administered allMedications 2.16.840.1.113883.3.560.1.68 substance_ordered allMedications 2.16.840.1.113883.3.560.1.65 substance_adverse_event allergies 2.16.840.1.113883.3.560.1.67 substance_intolerance allergies 2.16.840.1.113883.3.560.1.66 substance_allergy allergies 2.16.840.1.113883.3.560.1.93 substance_recommended allMedications 2.16.840.1.113883.3.560.1.165 substance_adverse_event allergies NEGATION 2.16.840.1.113883.3.560.1.167 substance_intolerance allergies NEGATION 2.16.840.1.113883.3.560.1.164 substance_administered allMedications NEGATION 2.16.840.1.113883.3.560.1.168 substance_ordered allMedications NEGATION 2.16.840.1.113883.3.560.1.193 substance_recommended allMedications NEGATION 2.16.840.1.113883.3.560.1.166 substance_allergy allergies NEGATION

INTERVENTIONS

2.16.840.1.113883.3.560.1.43 intervention_adverse_event allergies 2.16.840.1.113883.3.560.1.44 intervention_intolerance allergies 2.16.840.1.113883.3.560.1.45 intervention_ordered procedures 2.16.840.1.113883.3.560.1.46 intervention_performed procedures 2.16.840.1.113883.3.560.1.47 intervention_result procedureResults 2.16.840.1.113883.3.560.1.89 intervention_recommended procedures 2.16.840.1.113883.3.560.1.143 intervention_adverse_event allergies NEGATION 2.16.840.1.113883.3.560.1.144 intervention_intolerance allergies NEGATION 2.16.840.1.113883.3.560.1.145 intervention_ordered procedures NEGATION 2.16.840.1.113883.3.560.1.146 intervention_performed procedures NEGATION 2.16.840.1.113883.3.560.1.147 intervention_result procedureResults NEGATION 2.16.840.1.113883.3.560.1.189 intervention_recommended procedures NEGATION

SYMPTOMS

2.16.840.1.113883.3.560.1.69 symptom_active allProblems 2.16.840.1.113883.3.560.1.70 symptom_assessed allProblems 2.16.840.1.113883.3.560.1.97 symptom_inactive allProblems 2.16.840.1.113883.3.560.1.98 symptom_resolved allProblems 2.16.840.1.113883.3.560.1.169 symptom_active allProblems NEGATION 2.16.840.1.113883.3.560.1.170 symptom_assessed allProblems NEGATION 2.16.840.1.113883.3.560.1.197 symptom_inactive allProblems NEGATION 2.16.840.1.113883.3.560.1.198 symptom_resolved allProblems NEGATION

FUNCTIONAL STATUSES

2.16.840.1.113883.3.560.1.41 functional_status procedureResults 2.16.840.1.113883.3.560.1.85 functional_status_performed procedureResults 2.16.840.1.113883.3.560.1.86 functional_status_ordered procedureResults 2.16.840.1.113883.3.560.1.87 functional_status_recommended procedureResults 2.16.840.1.113883.3.560.1.88 functional_status_result procedureResults 2.16.840.1.113883.3.560.1.185 functional_status_performed procedureResults NEGATION 2.16.840.1.113883.3.560.1.186 functional_status_ordered procedureResults NEGATION 2.16.840.1.113883.3.560.1.187 functional_status_recommended procedureResults NEGATION 2.16.840.1.113883.3.560.1.188 functional_status_result procedureResults NEGATION 2.16.840.1.113883.3.560.1.141 functional_status procedureResults NEGATION

RISK CATEGORY/ASSESSMENTS 2.16.840.1.113883.3.560.1.21 risk_category_assessment procedures 2.16.840.1.113883.3.560.1.121 risk_category_assessment procedures NEGATION

PROVIDER_CARE_EXPERIENCES

2.16.840.1.113883.3.560.1.28 provider_care_experience N/A 2.16.840.1.113883.3.560.1.128 provider_care_experience N/A NEGATION

PATIENT_CARE_EXPERIENCES

2.16.840.1.113883.3.560.1.96 patient_care_experience N/A 2.16.840.1.113883.3.560.1.196 patient_care_experience N/A NEGATION

PREFERENCES

2.16.840.1.113883.3.560.1.59 preference_provider N/A 2.16.840.1.113883.3.560.1.58 preference_patient N/A

SYSTEM CHARACTERISTICS

2.16.840.1.113883.3.560.1.94 system_characteristic N/A 2.16.840.1.113883.3.560.1.194 system_characteristic N/A NEGATION

PROVIDER CHARACTERISTICS

2.16.840.1.113883.3.560.1.95 provider_characteristic N/A 2.16.840.1.113883.3.560.1.195 provider_characteristic N/A NEGATION

TRANSFERS

2.16.840.1.113883.3.560.1.71 transfer_from N/A 2.16.840.1.113883.3.560.1.72 transfer_to N/A 2.16.840.1.113883.3.560.1.171 transfer_from N/A NEGATION 2.16.840.1.113883.3.560.1.172 transfer_to N/A NEGATION