Class: Bio::DDBJ::XML::GetEntry

Inherits:
Bio::DDBJ::XML show all
Defined in:
lib/bio/io/ddbjxml.rb

Overview

GetEntry

Retrieves database entries.

Examples

serv = Bio::DDBJ::XML::GetEntry.new
puts serv.getDDBJEntry('AB000050')
puts serv. getPDBEntry('1AAR')

WSDL Methods

  • getEntry(database, var, param1, param2)

  • getEntry(database, var)

  • getDDBJEntry(accession)

  • getDDBJCONEntry(accession)

  • getDDBJVerEntry(accession)

  • getLocus_DDBJEntry(locus)

  • getGene_DDBJEntry(gene)

  • getProd_DDBJEntry(products)

  • getPID_DDBJEntry(pid)

  • getClone_DDBJEntry(clone)

  • getXML_DDBJEntry(accession)

  • getEMBLEntry(accession)

  • getSWISSEntry(accession)

  • getPIREntry(accession)

  • getPRFEntry(accession)

  • getPDBEntry(accession)

  • getQVEntry(accession)

  • getDADEntry(accession)

  • getPID_DADEntry(pid)

  • getFASTA_DDBJEntry(accession)

  • getFASTA_DDBJCONEntry(accession)

  • getFASTA_DDBJVerEntry(accession)

  • getFASTA_DDBJSeqEntry(accession, start, end)

  • getFASTA_DADEntry(accession)

  • getFASTA_PIREntry(accession)

  • getFASTA_SWISSEntry(accession)

  • getFASTA_PDBEntry(accession)

  • getFASTA_PRFEntry(accession)

  • getFASTA_CDSEntry(accession)

References

Constant Summary collapse

SERVER_URI = 
BASE_URI + "GetEntry.wsdl"

Constants inherited from Bio::DDBJ::XML

BASE_URI

Instance Attribute Summary

Attributes inherited from SOAPWSDL

#log, #wsdl

Method Summary

Methods inherited from Bio::DDBJ::XML

#initialize

Methods inherited from SOAPWSDL

#initialize, #list_methods

Constructor Details

This class inherits a constructor from Bio::DDBJ::XML

Dynamic Method Handling

This class handles dynamic methods through the method_missing method in the class Bio::SOAPWSDL