Module: Bio::Conduit

Defined in:

lib/bio/conduit/queues.rb,
lib/bio/conduit/process.rb,
lib/bio/conduit/samples.rb,
lib/bio/conduit/version.rb,
lib/bio/conduit/exception.rb,
lib/bio/conduit/template/sge.rb,
lib/bio/conduit/template/torque.rb

Defined Under Namespace

Modules: Template Classes: CommandError, FileNotFound, Process, Samples, Step

Constant Summary

QUEUES =

{
    "torque" => {
        command: 'qsub <options> -',
        template: Bio::Conduit::Template::TORQUE
    },
    "sge" => {
        command: 'qsub <options> -',
        template: Bio::Conduit::Template::SGE
    },
    "bash" => {
        command: 'bash <options>',
        template: Bio::Conduit::Template::SGE
    }
}

VERSION =

'1.0.0'