Ciika

Ciika is utility tool to handle metadata of public NGSeq repository.

Installation

Add this line to your application's Gemfile:

gem 'ciika'

And then execute:

$ bundle

Or install it yourself as:

$ gem install ciika

Usage

Parse Sequence Read Archive metadata xml

xml = "/path/to/DRA000001.experiment.xml"
data = Ciika::SRA::Experiment.new(xml).parse

Contributing

Bug reports and pull requests are welcome on GitHub at https://github.com/inutano/ciika.