Class: Ms::Sequest::Sqt::Match::Percolator
- Inherits:
-
Ms::Sequest::Sqt::Match
- Object
- Ms::Sequest::Sqt::Match
- Ms::Sequest::Sqt::Match::Percolator
- Defined in:
- lib/ms/sequest/sqt.rb
Constant Summary
Constants inherited from Ms::Sequest::Sqt::Match
Instance Method Summary collapse
- #negative_q_value ⇒ Object
- #negative_q_value=(arg) ⇒ Object
-
#percolator_score ⇒ Object
we will keep access to these old terms since we can then access routines that sort on xcorr…
- #percolator_score=(score) ⇒ Object
-
#probability ⇒ Object
for compatibility with scripts that want this guy.
- #q_value ⇒ Object
Methods inherited from Ms::Sequest::Sqt::Match
Instance Method Details
#negative_q_value ⇒ Object
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# File 'lib/ms/sequest/sqt.rb', line 360 def negative_q_value self[5] end |
#negative_q_value=(arg) ⇒ Object
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# File 'lib/ms/sequest/sqt.rb', line 363 def negative_q_value=(arg) self[5] = arg end |
#percolator_score ⇒ Object
we will keep access to these old terms since we can then access routines that sort on xcorr… undef_method :xcorr undef_method :xcorr= undef_method :sp undef_method :sp=
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# File 'lib/ms/sequest/sqt.rb', line 354 def percolator_score self[4] end |
#percolator_score=(score) ⇒ Object
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# File 'lib/ms/sequest/sqt.rb', line 357 def percolator_score=(score) self[4] = score end |
#probability ⇒ Object
for compatibility with scripts that want this guy
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# File 'lib/ms/sequest/sqt.rb', line 370 def probability -self[5] end |
#q_value ⇒ Object
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# File 'lib/ms/sequest/sqt.rb', line 366 def q_value -self[5] end |