Class: SequencescapeExcel::SpecialisedField::SangerPlateId
- Inherits:
-
Object
- Object
- SequencescapeExcel::SpecialisedField::SangerPlateId
- Includes:
- Base, ValueRequired
- Defined in:
- app/sequencescape_excel/sequencescape_excel/specialised_field/sanger_plate_id.rb
Overview
A required field if it is a plate manifest. Checked to ensure that it is the same as the sanger human barcode for sample, or is a valid foreign barcode. Updated if there is a valid foreign barcode.
Instance Attribute Summary collapse
-
#foreign_barcode_format ⇒ Object
readonly
Returns the value of attribute foreign_barcode_format.
Attributes included from Base
#sample_manifest_asset, #value
Instance Method Summary collapse
Methods included from Base
Instance Attribute Details
#foreign_barcode_format ⇒ Object (readonly)
Returns the value of attribute foreign_barcode_format
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# File 'app/sequencescape_excel/sequencescape_excel/specialised_field/sanger_plate_id.rb', line 14 def @foreign_barcode_format end |
Instance Method Details
#update(attributes = {}) ⇒ Object
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# File 'app/sequencescape_excel/sequencescape_excel/specialised_field/sanger_plate_id.rb', line 18 def update(attributes = {}) return unless valid? && attributes[:aliquot].present? && .present? # checking if the plate this well belongs to already has this foreign barcode set in its list of barcodes. # or if it contains a foreign barcode with the same format, then update that existing one = attributes[:aliquot].receptacle.plate..find do |item| item[:format] == .to_s end if .present? if . != value .update(barcode: value) if attributes[:aliquot].sample.sample_manifest.present? attributes[:aliquot].sample.sample_manifest. end end else attributes[:aliquot].receptacle.plate. << Barcode.new(format: , barcode: value) if attributes[:aliquot].sample.sample_manifest.present? attributes[:aliquot].sample.sample_manifest. end end end |