Module: StudyReport::AssetDetails

Included in:
Receptacle
Defined in:
app/models/study_report/asset_details.rb

Overview

rubocop:todo Style/Documentation

Instance Method Summary collapse

Instance Method Details

#qc_report ⇒ Object 


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# File 'app/models/study_report/asset_details.rb', line 2

def qc_report
  qc_data = {
    supplier_volume: 0
  }

  sample = primary_aliquot.try(:sample)
  if sample.present?
    supplier_sample_name = if sample.empty_supplier_sample_name
                             'Blank'
                           else
                             sample.sample_metadata.supplier_name || sample.sanger_sample_id || sample.name
                           end

    qc_data.merge!(supplier: sample.sample_manifest.try(:supplier).try(:name),
                   sample_name: supplier_sample_name,
                   sanger_sample_id: sample.sanger_sample_id,
                   control: sample.control,
                   status: (sample.updated_by_manifest ? 'Updated by manifest' : 'Awaiting manifest'),

                   supplier_gender: sample.sample_metadata.gender,
                   cohort: sample.sample_metadata.cohort,
                   country_of_origin: sample.sample_metadata.country_of_origin,
                   geographical_region: sample.sample_metadata.geographical_region,
                   ethnicity: sample.sample_metadata.ethnicity,
                   dna_source: sample.sample_metadata.dna_source,
                   is_resubmitted: sample.sample_metadata.is_resubmitted)
  end

  qc_data
end