Method List
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#add_pep_ev MzID::PSM
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#attr MzID::ParserSax::SpectraIDHandler
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#attr MzID::ParserSax::DBSequenceHandler
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#attr MzID::ParserSax::PeptideHandler
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#attr MzID::ParserSax::PeptideEventHandler
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#attrs_done MzID::ParserSax::SpectraIDHandler
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#cache_db_seq_entries MzID::BatchParser
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#cache_db_seq_entries MzID::FilteredStreamingParser
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#cache_ids MzID::StreamingParserLines
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#cache_ids MzID::StreamingParser
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#cache_ids MzID::FilteredStreamingParser
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#cache_ids2 MzID::FilteredStreamingParser
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#cache_pep_ev MzID::StreamingParser
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#cache_pep_ev MzID::BatchParser
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#cache_pep_ev MzID::FilteredStreamingParser
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#dbseq_count MzID::ParserSax::CounterHandler
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#dbseq_h MzID::ParserSax::DBSequenceHandler
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#each_psm MzID::StreamingParser
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#each_psm MzID::StreamingParserLines
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#each_psm MzID::BatchParser
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#each_psm MzID::FilteredStreamingParser
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#each_spectrum MzID::BatchParser
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#end_element MzID::ParserSax::DBSequenceHandler
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#end_element MzID::ParserSax::PeptideEventHandler
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#end_element MzID::ParserSax::SpectraIDHandler
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#end_element MzID::ParserSax::PeptideHandler
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#get_db_seq_ref MzID::PeptideEvidence
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#get_end_pos MzID::PeptideEvidence
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#get_id MzID::PeptideEvidence
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#get_id MzID::PSM
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#get_is_decoy MzID::StreamingParserLines
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#get_is_decoy MzID::PeptideEvidence
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#get_mods MzID::PSM
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#get_pass_threshold MzID::PSM
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#get_pep MzID::PSM
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#get_pep_end MzID::StreamingParserLines
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#get_pep_ev MzID::PSM
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#get_pep_id MzID::PeptideEvidence
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#get_pep_ref MzID::PSM
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#get_pep_start MzID::StreamingParserLines
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#get_post MzID::PeptideEvidence
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#get_pre MzID::PeptideEvidence
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#get_prot_id MzID::StreamingParserLines
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#get_prot_id MzID::FilteredStreamingParser
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#get_prot_id MzID::PeptideEvidence
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#get_psm MzID::FilteredStreamingParser
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#get_spec_num MzID::PSM
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#get_spec_prob MzID::PSM
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#get_spec_ref MzID::PSM
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#get_start_pos MzID::PeptideEvidence
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#initialize MzID::ParserSax::PeptideEventHandler
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#initialize MzID::StreamingParserLines
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#initialize MzID::ParserSax::PeptideHandler
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#initialize MzID::ParserSax::SpectraIDHandler
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#initialize MzID::ParserSax::DBSequenceHandler
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#initialize MzID::StreamingParser
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#initialize MzID::ParserSax::CounterHandler
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#initialize MzID::FilteredStreamingParser
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#initialize MzID::PSM
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#initialize MzID::PeptideEvidence
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#initialize MzID::BatchParser
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#initialize MzID::BaseParser
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#initialize MzID::ParserSax
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#mod_h MzID::ParserSax::PeptideHandler
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#pbar MzID::ParserSax::PeptideEventHandler
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#pbar MzID::ParserSax::SpectraIDHandler
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#pbar MzID::ParserSax::PeptideHandler
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#pbar MzID::ParserSax::DBSequenceHandler
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#pep_count MzID::ParserSax::CounterHandler
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#pep_ev_h MzID::ParserSax::PeptideEventHandler
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#pep_ev_h_dbseqRef MzID::FilteredStreamingParser
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#pep_h MzID::ParserSax::PeptideHandler
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#pepev_count MzID::ParserSax::CounterHandler
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#set_pep MzID::PSM
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#set_spec_prob MzID::PSM
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#spec_count MzID::ParserSax::CounterHandler
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#spec_h MzID::ParserSax::SpectraIDHandler
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#start_element MzID::ParserSax::SpectraIDHandler
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#start_element MzID::ParserSax::PeptideEventHandler
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#start_element MzID::ParserSax::PeptideHandler
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#start_element MzID::ParserSax::CounterHandler
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#start_element MzID::ParserSax::DBSequenceHandler
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#text MzID::ParserSax::PeptideHandler
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#to_s MzID::PeptideEvidence
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#to_s MzID::PSM
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#value MzID::ParserSax::DBSequenceHandler
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#write_to_csv MzID::ParserSax
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#write_to_csv MzID::StreamingParserLines
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#write_to_file MzID::FilteredStreamingParser