Class List

Classes Methods Files

Search:

Top Level Namespace
AASMTop Level Namespace
- ExtensionsAASM
Ability < ObjectTop Level Namespace
- Administrator < ObjectAbility
- BaseUser < ObjectAbility
- DataAccessCoordinator < ObjectAbility
- LabManager < ObjectAbility
- Manager < ObjectAbility
- QaManager < ObjectAbility
- SampleManagementGel < ObjectAbility
- SampleManagementManager < ObjectAbility
Ability::Shared::LabUserAbility::Shared
Ability::Shared::PowerUserAbility::Shared
Ability::Shared::SampleManagementUserAbility::Shared
Ability::Shared::SuperUserAbility::Shared
Ability::Shared::TagCreationUserAbility::Shared
AbilityAnalysis < ObjectTop Level Namespace
- SpecGenerator < ObjectAbilityAnalysis
- UserStub < StructAbilityAnalysis
AccessionTop Level Namespace
- AccessionableAccession
  - AccessionableFile < TempfileAccession::Accessionable
- Configuration < ObjectAccession
- Contact < ObjectAccession
- CoreExtensionsAccession
  - StringAccession::CoreExtensions
- EqualityAccession
- HelpersAccession
- NullResponse < ObjectAccession
- Request < ObjectAccession
- Response < ObjectAccession
- Sample < ObjectAccession
- Service < ObjectAccession
- Submission < ObjectAccession
  - Payload < ObjectAccession::Submission
- Tag < ObjectAccession
- TagList < ObjectAccession
AccessionService < ObjectTop Level Namespace
- AccessionedFile < FileAccessionService
AccessionableTop Level Namespace
- ArrayExpressTag < TagAccessionable
- Base < ObjectAccessionable
  - Tag < ObjectAccessionable::Base
- Dac < BaseAccessionable
- EgaTag < TagAccessionable
- Policy < BaseAccessionable
- Sample < BaseAccessionable
- Study < BaseAccessionable
- Submission < BaseAccessionable
  - Contact < ObjectAccessionable::Submission
ActiveModel::ValidationError < ObjectActiveModel
ActiveRecord::ActiveRecordError < ObjectActiveRecord
ActiveRecord::AssociationTypeMismatch < ObjectActiveRecord
ActiveRecord::Base < ObjectActiveRecord
ActiveRecord::RecordInvalid < ObjectActiveRecord
ActiveRecord::RecordNotFound < ObjectActiveRecord
ActiveRecord::RecordNotSaved < ObjectActiveRecord
ActsAsDescriptableTop Level Namespace
AddSpikedInControlTask < TaskTop Level Namespace
Admin::AbilitiesController < ApplicationControllerAdmin
Admin::BaitLibraries::BaitLibrarySuppliersController < ApplicationControllerAdmin::BaitLibraries
Admin::BaitLibraries::BaitLibraryTypesController < ApplicationControllerAdmin::BaitLibraries
Admin::BaitLibrariesController < ApplicationControllerAdmin
Admin::CustomTextsController < ApplicationControllerAdmin
Admin::DelayedJobsController < ApplicationControllerAdmin
Admin::FacultySponsorsController < ApplicationControllerAdmin
Admin::PlatePurposesController < ApplicationControllerAdmin
Admin::PrimerPanelsController < ApplicationControllerAdmin
Admin::ProgramsController < ApplicationControllerAdmin
Admin::ProjectsController < ApplicationControllerAdmin
Admin::RobotPropertiesController < ApplicationControllerAdmin
Admin::RobotsController < ApplicationControllerAdmin
Admin::Roles::UsersController < ApplicationControllerAdmin::Roles
Admin::RolesController < ApplicationControllerAdmin
Admin::StudiesController < ApplicationControllerAdmin
Admin::UsersController < ApplicationControllerAdmin
AdminController < ApplicationControllerTop Level Namespace
AkerTop Level Namespace
- ConfigParser < ObjectAker
- Container < ApplicationRecordAker
- FactoriesAker
  - Container < ObjectAker::Factories
  - Job < ObjectAker::Factories
  - Material < ObjectAker::Factories
- Job < ApplicationRecordAker
- JobsController < ApplicationControllerAker
- Mapping < ObjectAker
- Material < MappingAker
Aliquot < ApplicationRecordTop Level Namespace
- AliquotableAliquot
  - ClassMethodsAliquot::Aliquotable
- DataForSubstitutionAliquot
- DeprecatedBehavioursAliquot
  - RequestAliquot::DeprecatedBehaviours
- InsertSize < RangeAliquot
- RemoverAliquot
AliquotIndex < ApplicationRecordTop Level Namespace
AliquotIndexer < ObjectTop Level Namespace
- AliquotScopesAliquotIndexer
- IndexableAliquotIndexer
ApiTop Level Namespace
- AliquotIO < BaseApi
  - ExtensionsApi::AliquotIO
    - ClassMethodsApi::AliquotIO::Extensions
- AssetLinkIO < BaseApi
  - ExtensionsApi::AssetLinkIO
    - ClassMethodsApi::AssetLinkIO::Extensions
- Base < ObjectApi
- BatchIO < BaseApi
  - ExtensionsApi::BatchIO
    - ClassMethodsApi::BatchIO::Extensions
- BatchRequestIO < BaseApi
  - ExtensionsApi::BatchRequestIO
    - ClassMethodsApi::BatchRequestIO::Extensions
- EndpointHandler < ServiceApi
- LaneIO < BaseApi
  - ExtensionsApi::LaneIO
    - ClassMethodsApi::LaneIO::Extensions
- LibraryTubeIO < BaseApi
  - ExtensionsApi::LibraryTubeIO
    - ClassMethodsApi::LibraryTubeIO::Extensions
- MultiplexedLibraryTubeIO < BaseApi
  - ExtensionsApi::MultiplexedLibraryTubeIO
    - ClassMethodsApi::MultiplexedLibraryTubeIO::Extensions
- OrderIO < BaseApi
- PacBioLibraryTubeIO < BaseApi
  - ExtensionsApi::PacBioLibraryTubeIO
    - ClassMethodsApi::PacBioLibraryTubeIO::Extensions
- PlateIO < BaseApi
  - ExtensionsApi::PlateIO
    - ClassMethodsApi::PlateIO::Extensions
- PlatePurposeIO < BaseApi
  - ExtensionsApi::PlatePurposeIO
    - ClassMethodsApi::PlatePurposeIO::Extensions
- ProjectIO < BaseApi
  - ExtensionsApi::ProjectIO
    - ClassMethodsApi::ProjectIO::Extensions
- PulldownMultiplexedLibraryTubeIO < BaseApi
  - ExtensionsApi::PulldownMultiplexedLibraryTubeIO
    - ClassMethodsApi::PulldownMultiplexedLibraryTubeIO::Extensions
- ReferenceGenomeIO < BaseApi
  - ExtensionsApi::ReferenceGenomeIO
    - ClassMethodsApi::ReferenceGenomeIO::Extensions
- RequestIO < BaseApi
  - ExtensionsApi::RequestIO
    - ClassMethodsApi::RequestIO::Extensions
  - WarehouseAsset < ObjectApi::RequestIO
- RootService < ServiceApi
  - RootResponseApi::RootService
- SampleIO < BaseApi
  - ExtensionsApi::SampleIO
    - ClassMethodsApi::SampleIO::Extensions
- SampleTubeIO < BaseApi
  - ExtensionsApi::SampleTubeIO
    - ClassMethodsApi::SampleTubeIO::Extensions
- StudyIO < BaseApi
  - ExtensionsApi::StudyIO
    - ClassMethodsApi::StudyIO::Extensions
- StudySampleIO < BaseApi
  - ExtensionsApi::StudySampleIO
    - ClassMethodsApi::StudySampleIO::Extensions
- SubmissionIO < BaseApi
- TagIO < BaseApi
  - ExtensionsApi::TagIO
    - ClassMethodsApi::TagIO::Extensions
- V2Api
  - AkerApi::V2
    - JobsController < ApplicationControllerApi::V2::Aker
  - AliquotResource < BaseResourceApi::V2
  - AliquotsController < ResourceControllerApi::V2
  - AssetResource < BaseResourceApi::V2
  - AssetsController < ResourceControllerApi::V2
  - BaseResource < ResourceApi::V2
  - CommentResource < BaseResourceApi::V2
  - CommentsController < ResourceControllerApi::V2
  - CustomMetadatumCollectionResource < BaseResourceApi::V2
  - CustomMetadatumCollectionsController < ResourceControllerApi::V2
  - FragmentResource < ResourceApi::V2
  - HeronApi::V2
    - PlatesController < ApplicationControllerApi::V2::Heron
    - TubeRackStatusesController < ApplicationControllerApi::V2::Heron
    - TubeRacksController < ApplicationControllerApi::V2::Heron
  - LabwareController < ResourceControllerApi::V2
  - LabwareResource < BaseResourceApi::V2
  - LaneResource < BaseResourceApi::V2
  - LanesController < ResourceControllerApi::V2
  - LotResource < BaseResourceApi::V2
  - LotTypeResource < BaseResourceApi::V2
  - LotTypesController < ResourceControllerApi::V2
  - LotsController < ResourceControllerApi::V2
  - OrderResource < BaseResourceApi::V2
  - OrdersController < ResourceControllerApi::V2
  - PickListResource < BaseResourceApi::V2
  - PickListsController < ResourceControllerApi::V2
  - PlateResource < BaseResourceApi::V2
  - PlateTemplateResource < BaseResourceApi::V2
  - PlateTemplatesController < ResourceControllerApi::V2
  - PlatesController < ResourceControllerApi::V2
  - PreCapturePoolResource < BaseResourceApi::V2
  - PreCapturePoolsController < ResourceControllerApi::V2
  - PrimerPanelResource < BaseResourceApi::V2
  - PrimerPanelsController < ResourceControllerApi::V2
  - ProjectResource < BaseResourceApi::V2
  - ProjectsController < ResourceControllerApi::V2
  - PurposeResource < BaseResourceApi::V2
  - PurposesController < ResourceControllerApi::V2
  - QcAssayResource < BaseResourceApi::V2
  - QcAssaysController < ResourceControllerApi::V2
  - QcResultResource < BaseResourceApi::V2
  - QcResultsController < ResourceControllerApi::V2
  - QcableResource < BaseResourceApi::V2
  - QcablesController < ResourceControllerApi::V2
  - RackedTubeResource < BaseResourceApi::V2
  - RackedTubesController < ResourceControllerApi::V2
  - ReceptacleResource < BaseResourceApi::V2
  - ReceptaclesController < ResourceControllerApi::V2
  - RequestResource < BaseResourceApi::V2
  - RequestTypeResource < BaseResourceApi::V2
  - RequestTypesController < ResourceControllerApi::V2
  - RequestsController < ResourceControllerApi::V2
  - SampleMetadataController < ResourceControllerApi::V2
  - SampleMetadataResource < BaseResourceApi::V2
  - SampleResource < BaseResourceApi::V2
  - SamplesController < ResourceControllerApi::V2
  - StudiesController < ResourceControllerApi::V2
  - StudyResource < BaseResourceApi::V2
  - SubmissionResource < BaseResourceApi::V2
  - SubmissionsController < ResourceControllerApi::V2
  - TagGroupResource < BaseResourceApi::V2
  - TagGroupsController < ResourceControllerApi::V2
  - TagLayoutTemplateResource < BaseResourceApi::V2
  - TagLayoutTemplatesController < ResourceControllerApi::V2
  - TagsController < ResourceControllerApi::V2
  - TemplateResource < BaseResourceApi::V2
  - TemplatesController < ResourceControllerApi::V2
  - TransferRequestResource < BaseResourceApi::V2
  - TransferRequestsController < ResourceControllerApi::V2
  - TubeRackResource < BaseResourceApi::V2
  - TubeRackStatusResource < BaseResourceApi::V2
  - TubeRacksController < ResourceControllerApi::V2
  - TubeResource < BaseResourceApi::V2
  - TubesController < ResourceControllerApi::V2
  - UserResource < BaseResourceApi::V2
  - UsersController < ResourceControllerApi::V2
  - WellResource < BaseResourceApi::V2
  - WellsController < ResourceControllerApi::V2
  - WorkOrderResource < BaseResourceApi::V2
  - WorkOrdersController < ResourceControllerApi::V2
- WellIO < BaseApi
  - ExtensionsApi::WellIO
    - ClassMethodsApi::WellIO::Extensions
Api::Messages::BarcodeIO < BaseApi::Messages
Api::Messages::FlowcellIO < BaseApi::Messages
- AliquotExtensionsApi::Messages::FlowcellIO
- ControlLaneExtensionsApi::Messages::FlowcellIO
- ExtensionsApi::Messages::FlowcellIO
  - ClassMethodsApi::Messages::FlowcellIO::Extensions
- LaneExtensionsApi::Messages::FlowcellIO
- ProjectExtensionsApi::Messages::FlowcellIO
Api::Messages::FluidigmPlateIO < BaseApi::Messages
- WellExtensionsApi::Messages::FluidigmPlateIO
Api::Messages::PacBioRunIO < BaseApi::Messages
Api::Messages::PacBioRunWithTag2IO < BaseApi::Messages
Api::Messages::QcResultIO < BaseApi::Messages
- AliquotExtensionsApi::Messages::QcResultIO
- AssetExtensionsApi::Messages::QcResultIO
- ExtensionsApi::Messages::QcResultIO
- TubeExtensionsApi::Messages::QcResultIO
- WellExtensionsApi::Messages::QcResultIO
Api::Messages::TubeStockResourceIO < BaseApi::Messages
Api::Messages::WellStockResourceIO < BaseApi::Messages
ApiApplication < ApplicationRecordTop Level Namespace
ApiToolsTop Level Namespace
- ClassMethodsApiTools
ApiV2Generator < NamedBaseTop Level Namespace
ApplicationController < BaseTop Level Namespace
ApplicationHelperTop Level Namespace
ApplicationRecord < BaseTop Level Namespace
ArrayWithFieldListTop Level Namespace
Asset < ApplicationRecordTop Level Namespace
- ApplyIdToNameOnCreateAsset
- Finder < ObjectAsset
- OwnershipAsset
  - ChangesOwnerAsset::Ownership
    - ClassMethodsAsset::Ownership::ChangesOwner
  - OwnedAsset::Ownership
  - UnownedAsset::Ownership
- SharedLibraryTubeBehaviourAsset
- StockAsset
  - CanCreateStockAssetAsset::Stock
AssetAudit < ApplicationRecordTop Level Namespace
AssetAuditsController < ApplicationControllerTop Level Namespace
AssetBarcode < ApplicationRecordTop Level Namespace
AssetCreation < ApplicationRecordTop Level Namespace
AssetGroup < ApplicationRecordTop Level Namespace
AssetGroupAsset < ApplicationRecordTop Level Namespace
AssetLink < ApplicationRecordTop Level Namespace
- AssociationsAssetLink
  - ClassMethodsAssetLink::Associations
- Job < BuilderJobAssetLink
AssetShape < ApplicationRecordTop Level Namespace
AssetsController < ApplicationControllerTop Level Namespace
- PlateLayout < ObjectAssetsController
AssetsHelperTop Level Namespace
AssignTagsTask < TaskTop Level Namespace
AssignTagsToTubesTask < AssignTagsTaskTop Level Namespace
AssignTubesToMultiplexedWellsTask < TaskTop Level Namespace
AttributableTop Level Namespace
- Association < ObjectAttributable
  - TargetAttributable::Association
    - InstanceMethodsAttributable::Association::Target
- Attribute < ObjectAttributable
- ClassMethodsAttributable
- CustomValidator < EachValidatorAttributable
AuthenticatedSystemTop Level Namespace
AuthenticatedTestHelperTop Level Namespace
AutomatedOrder < FlexibleSubmissionTop Level Namespace
BaitLibrary < ApplicationRecordTop Level Namespace
- AssociationsBaitLibrary
- Supplier < ApplicationRecordBaitLibrary
BaitLibraryLayout < ApplicationRecordTop Level Namespace
BaitLibraryType < ApplicationRecordTop Level Namespace
Barcode < ApplicationRecordTop Level Namespace
- BarcodeableBarcode
- FormatHandlersBarcode
  - AkerBarcode < BaseRegExBarcodeBarcode::FormatHandlers
  - AlderleyParkEagle < BaseRegExBarcodeBarcode::FormatHandlers
  - AlderlyParkV1 < BaseRegExBarcodeBarcode::FormatHandlers
  - AlderlyParkV2 < BaseRegExBarcodeBarcode::FormatHandlers
  - BaseRegExBarcode < ObjectBarcode::FormatHandlers
  - CambridgeAZ < BaseRegExBarcodeBarcode::FormatHandlers
  - CambridgeAZEagle < BaseRegExBarcodeBarcode::FormatHandlers
  - CambridgeAZV2 < BaseRegExBarcodeBarcode::FormatHandlers
  - Cgap < BaseRegExBarcodeBarcode::FormatHandlers
  - CgapPlate < BaseRegExBarcodeBarcode::FormatHandlers
  - CgapRack < BaseRegExBarcodeBarcode::FormatHandlers
  - Eagle < BaseRegExBarcodeBarcode::FormatHandlers
  - Ean13IncompatibleBarcode::FormatHandlers
  - External < BaseRegExBarcodeBarcode::FormatHandlers
  - Fluidigm < BaseRegExBarcodeBarcode::FormatHandlers
  - FluidxBarcode < BaseRegExBarcodeBarcode::FormatHandlers
  - Glasgow < BaseRegExBarcodeBarcode::FormatHandlers
  - GlasgowEagle < BaseRegExBarcodeBarcode::FormatHandlers
  - GlasgowV2 < BaseRegExBarcodeBarcode::FormatHandlers
  - GlasgowV3 < BaseRegExBarcodeBarcode::FormatHandlers
  - HeronTailed < BaseRegExBarcodeBarcode::FormatHandlers
  - Infinium < BaseRegExBarcodeBarcode::FormatHandlers
  - Randox < BaseRegExBarcodeBarcode::FormatHandlers
  - RandoxEagle < BaseRegExBarcodeBarcode::FormatHandlers
  - RandoxV2 < BaseRegExBarcodeBarcode::FormatHandlers
  - SangerBase < ObjectBarcode::FormatHandlers
  - SangerCode39 < SangerBaseBarcode::FormatHandlers
  - SangerEan13 < SangerBaseBarcode::FormatHandlers
  - UkBiocentreEagle < BaseRegExBarcodeBarcode::FormatHandlers
  - UkBiocentreUnid < BaseRegExBarcodeBarcode::FormatHandlers
  - UkBiocentreV1 < BaseRegExBarcodeBarcode::FormatHandlers
  - UkBiocentreV2 < BaseRegExBarcodeBarcode::FormatHandlers
  - UkBiocentreV3 < BaseRegExBarcodeBarcode::FormatHandlers
  - UkBiocentreV4 < BaseRegExBarcodeBarcode::FormatHandlers
  - UkBiocentreV5 < BaseRegExBarcodeBarcode::FormatHandlers
BarcodePrefix < ApplicationRecordTop Level Namespace
BarcodePrinter < ApplicationRecordTop Level Namespace
BarcodePrinterType < ApplicationRecordTop Level Namespace
BarcodePrinterType1DTube < BarcodePrinterTypeTop Level Namespace
BarcodePrinterType384DoublePlate < BarcodePrinterTypeTop Level Namespace
BarcodePrinterType384Plate < BarcodePrinterTypeTop Level Namespace
BarcodePrinterType96Plate < BarcodePrinterTypeTop Level Namespace
BarcodePrintersController < ApplicationControllerTop Level Namespace
BarcodePrintersHelperTop Level Namespace
BaseLoginProxy < ObjectTop Level Namespace
Batch < ApplicationRecordTop Level Namespace
- PipelineBehaviourBatch
- RequestBehaviourBatch
- RequestFailAndRemover < ObjectBatch
- StateMachineBehaviourBatch
BatchRequest < ApplicationRecordTop Level Namespace
Batches::CommentsController < ApplicationControllerBatches
Batches::RequestsController < ApplicationControllerBatches
BatchesController < ApplicationControllerTop Level Namespace
BatchesHelperTop Level Namespace
BillingTop Level Namespace
- AgressoProduct < ApplicationRecordBilling
- Configuration < ObjectBilling
- FactoryBilling
  - Base < ObjectBilling::Factory
  - LibraryCreation < BaseBilling::Factory
  - Sequencing < BaseBilling::Factory
- Field < ObjectBilling
- FieldsList < ObjectBilling
- Item < ApplicationRecordBilling
- Product < ApplicationRecordBilling
- ProductCatalogue < ApplicationRecordBilling
- Report < ObjectBilling
BillingReportsController < ApplicationControllerTop Level Namespace
BindingKitBarcodeTask < TaskTop Level Namespace
BootstrapHelperTop Level Namespace
BroadcastEvent < ApplicationRecordTop Level Namespace
- AssetAudit < BroadcastEventBroadcastEvent
- HelpersBroadcastEvent
  - ExternalSubjectsBroadcastEvent::Helpers
- LabEvent < BroadcastEventBroadcastEvent
- LabwareFailed < BroadcastEventBroadcastEvent
- LabwareReceived < BroadcastEventBroadcastEvent
- LibraryComplete < BroadcastEventBroadcastEvent
- LibraryStart < BroadcastEventBroadcastEvent
- MetadataHelpersBroadcastEvent
  - BlockMetadataFinder < ObjectBroadcastEvent::MetadataHelpers
  - MetadatableClassMethodsBroadcastEvent::MetadataHelpers
  - SimpleMetadataFinder < ObjectBroadcastEvent::MetadataHelpers
- OrderMade < BroadcastEventBroadcastEvent
- PlateCherrypicked < BroadcastEventBroadcastEvent
- PlateLibraryComplete < BroadcastEventBroadcastEvent
- QcAssay < BroadcastEventBroadcastEvent
- RenderHelpersBroadcastEvent
  - Render < ObjectBroadcastEvent::RenderHelpers
  - RenderableClassMethodsBroadcastEvent::RenderHelpers
- SampleManifestCreated < BroadcastEventBroadcastEvent
- SampleManifestUpdated < BroadcastEventBroadcastEvent
- SequencingComplete < BroadcastEventBroadcastEvent
- SequencingStart < BroadcastEventBroadcastEvent
- SubjectHelpersBroadcastEvent
  - BlockManySubjectAssociation < ObjectBroadcastEvent::SubjectHelpers
  - BlockSingleSubjectAssociation < ObjectBroadcastEvent::SubjectHelpers
  - BlockTargetLookupBroadcastEvent::SubjectHelpers
  - MultiTargetBroadcastEvent::SubjectHelpers
  - SeedSubjectAssociation < ObjectBroadcastEvent::SubjectHelpers
  - SimpleManySubjectAssociation < ObjectBroadcastEvent::SubjectHelpers
  - SimpleSingleSubjectAssociation < ObjectBroadcastEvent::SubjectHelpers
  - SimpleTargetLookupBroadcastEvent::SubjectHelpers
  - SingleTargetBroadcastEvent::SubjectHelpers
  - Subject < ObjectBroadcastEvent::SubjectHelpers
  - SubjectableBroadcastEvent::SubjectHelpers
  - SubjectableClassMethodsBroadcastEvent::SubjectHelpers
BudgetDivision < ApplicationRecordTop Level Namespace
- AssociationsBudgetDivision
BulkSubmission < ObjectTop Level Namespace
BulkSubmissionExcelTop Level Namespace
- Configuration < ConfigurationBulkSubmissionExcel
- Download < ObjectBulkSubmissionExcel
- DownloadsController < ApplicationControllerBulkSubmissionExcel
- WorksheetBulkSubmissionExcel
  - DataWorksheet < BaseBulkSubmissionExcel::Worksheet
BulkSubmissionsController < ApplicationControllerTop Level Namespace
BulkTransfer < ApplicationRecordTop Level Namespace
CapybaraFailureLoggerTop Level Namespace
CarrierWaveTop Level Namespace
- StorageCarrierWave
  - DirectDatabase < AbstractCarrierWave::Storage
    - File < ObjectCarrierWave::Storage::DirectDatabase
CherrypickTop Level Namespace
- VolumeByMicroLitreCherrypick
- VolumeByNanoGramsCherrypick
- VolumeByNanoGramsPerMicroLitreCherrypick
Cherrypick::Task::PickByMicroLitreCherrypick::Task
Cherrypick::Task::PickByNanoGramsCherrypick::Task
Cherrypick::Task::PickByNanoGramsPerMicroLitreCherrypick::Task
Cherrypick::Task::PickHelpersCherrypick::Task
CherrypickForFluidigmRequest < CherrypickRequestTop Level Namespace
- Metadata < BaseCherrypickForFluidigmRequest
CherrypickForPulldownPipeline < CherrypickingPipelineTop Level Namespace
CherrypickForPulldownRequest < CherrypickRequestTop Level Namespace
CherrypickPipeline < CherrypickingPipelineTop Level Namespace
CherrypickRequest < CustomerRequestTop Level Namespace
CherrypickTask < TaskTop Level Namespace
- ControlLocator < ObjectCherrypickTask
- PickTarget < ObjectCherrypickTask
  - Base < ObjectCherrypickTask::PickTarget
  - ByColumn < BaseCherrypickTask::PickTarget
  - ByInterlacedColumn < BaseCherrypickTask::PickTarget
  - ByRow < BaseCherrypickTask::PickTarget
CherrypickingPipeline < GenotypingPipelineTop Level Namespace
Comment < ApplicationRecordTop Level Namespace
CommentableTop Level Namespace
CommentsProxyTop Level Namespace
- Base < ObjectCommentsProxy
- Plate < BaseCommentsProxy
- Tube < BaseCommentsProxy
Control < ApplicationRecordTop Level Namespace
ControlPlate < PlateTop Level Namespace
ControlRequest < CustomerRequestTop Level Namespace
ControlRequestTypeCreationTop Level Namespace
CoreTop Level Namespace
- AbilitiesCore
  - ActionBehaviourCore::Abilities
  - Application < BaseCore::Abilities
  - Base < ObjectCore::Abilities
    - ClassMethodsCore::Abilities::Base
    - Recorder < ObjectCore::Abilities::Base
  - CompositeAbility < ObjectCore::Abilities
  - User < BaseCore::Abilities
- BenchmarkingCore
- InitializableCore
  - Initializer < ObjectCore::Initializable
  - InstanceMethodsCore::Initializable
- LoggingCore
- ReferencesCore
- Registry < ObjectCore
- Service < BaseCore
  - AuthenticationCore::Service
    - HelpersCore::Service::Authentication
    - UnauthenticatedError < ErrorCore::Service::Authentication
  - ContentFilteringCore::Service
    - HelpersCore::Service::ContentFiltering
    - InvalidBodyContentType < ErrorCore::Service::ContentFiltering
    - InvalidRequestedContentType < ErrorCore::Service::ContentFiltering
    - InvalidRequestedContentTypeOnFile < ErrorCore::Service::ContentFiltering
  - DeprecatedAction < ErrorCore::Service
  - EndpointHandlingCore::Service
  - Error < StandardErrorCore::Service
    - BehaviourCore::Service::Error
  - ErrorHandlingCore::Service
    - HelpersCore::Service::ErrorHandling
      - JsonError < ObjectCore::Service::ErrorHandling::Helpers
  - MethodNotAllowed < ErrorCore::Service
  - Request < ObjectCore::Service
  - Response < ObjectCore::Service
    - Initializer < ObjectCore::Service::Response
  - UnsupportedAction < ErrorCore::Service
Core::Endpoint::Base < ObjectCore::Endpoint
- InstanceBehaviourCore::Endpoint::Base
  - Handler < BasicHandlerCore::Endpoint::Base::InstanceBehaviour
- ModelBehaviourCore::Endpoint::Base
  - Handler < BasicHandlerCore::Endpoint::Base::ModelBehaviour
Core::Endpoint::BasicHandler < ObjectCore::Endpoint
- JsonCore::Endpoint::BasicHandler
Core::Endpoint::BasicHandler::ActionsCore::Endpoint::BasicHandler
- UnsupportedAction < StandardErrorCore::Endpoint::BasicHandler::Actions
Core::Endpoint::BasicHandler::Actions::BoundCore::Endpoint::BasicHandler::Actions
Core::Endpoint::BasicHandler::Actions::Bound::Handler < BasicHandlerCore::Endpoint::BasicHandler::Actions::Bound
Core::Endpoint::BasicHandler::Actions::FactoryCore::Endpoint::BasicHandler::Actions
- Nested < BasicHandlerCore::Endpoint::BasicHandler::Actions::Factory
Core::Endpoint::BasicHandler::Actions::GuardsCore::Endpoint::BasicHandler::Actions
- Guard < ObjectCore::Endpoint::BasicHandler::Actions::Guards
- GuardChain < ObjectCore::Endpoint::BasicHandler::Actions::Guards
- GuardProxy < ProxyObjectCore::Endpoint::BasicHandler::Actions::Guards
Core::Endpoint::BasicHandler::Actions::InnerActionCore::Endpoint::BasicHandler::Actions
Core::Endpoint::BasicHandler::Actions::StandardCore::Endpoint::BasicHandler::Actions
- InstanceMethodsCore::Endpoint::BasicHandler::Actions::Standard
Core::Endpoint::BasicHandler::Associations::BelongsToCore::Endpoint::BasicHandler::Associations
- Handler < ObjectCore::Endpoint::BasicHandler::Associations::BelongsTo
  - Association < ObjectCore::Endpoint::BasicHandler::Associations::BelongsTo::Handler
Core::Endpoint::BasicHandler::Associations::HasFileCore::Endpoint::BasicHandler::Associations
Core::Endpoint::BasicHandler::Associations::HasManyCore::Endpoint::BasicHandler::Associations
Core::Endpoint::BasicHandler::Associations::HasMany::Handler < BasicHandlerCore::Endpoint::BasicHandler::Associations::HasMany
Core::Endpoint::BasicHandler::EndpointLookupCore::Endpoint::BasicHandler
Core::Endpoint::BasicHandler::HandlersCore::Endpoint::BasicHandler
Core::Endpoint::BasicHandler::PagedCore::Endpoint::BasicHandler
- PagedTarget < ObjectCore::Endpoint::BasicHandler::Paged
  - PageOfResults < ObjectCore::Endpoint::BasicHandler::Paged::PagedTarget
Core::Io::Base < ObjectCore::Io
Core::Io::Base::EagerLoadingBehaviourCore::Io::Base
Core::Io::Base::JsonFormattingBehaviourCore::Io::Base
Core::Io::Base::JsonFormattingBehaviour::InputCore::Io::Base::JsonFormattingBehaviour
- AssociationHandlingCore::Io::Base::JsonFormattingBehaviour::Input
- ReadOnlyAttribute < ErrorCore::Io::Base::JsonFormattingBehaviour::Input
Core::Io::Base::JsonFormattingBehaviour::OutputCore::Io::Base::JsonFormattingBehaviour
Core::Io::Buffer < ObjectCore::Io
Core::Io::CollectionCore::Io
Core::Io::JsonCore::Io
- Stream < ObjectCore::Io::Json
  - Interface < ObjectCore::Io::Json::Stream
Core::Io::Json::GrammarCore::Io::Json
- Actions < ObjectCore::Io::Json::Grammar
- IntermediateCore::Io::Json::Grammar
- Leaf < ObjectCore::Io::Json::Grammar
- Node < ObjectCore::Io::Json::Grammar
- ResourceCore::Io::Json::Grammar
- Root < ObjectCore::Io::Json::Grammar
Core::Io::List < ObjectCore::Io
Core::Io::Registry < RegistryCore::Io
CreateAssetRequest < SystemRequestTop Level Namespace
CsvParserClientTop Level Namespace
CustomMetadatum < ApplicationRecordTop Level Namespace
CustomMetadatumCollection < ApplicationRecordTop Level Namespace
CustomText < ApplicationRecordTop Level Namespace
CustomerRequest < RequestTop Level Namespace
DataReleaseTop Level Namespace
DataReleaseStudyType < ApplicationRecordTop Level Namespace
- AssociationsDataReleaseStudyType
DbFile < ApplicationRecordTop Level Namespace
- UploaderDbFile
DelayedJobsHelperTop Level Namespace
DelegateValidationTop Level Namespace
- AlwaysValidValidator < ValidatorDelegateValidation
- CompositeValidator < ObjectDelegateValidation
- Validator < ObjectDelegateValidation
  - DelegateError < ErrorsDelegateValidation::Validator
DeployedTop Level Namespace
- RepoData < ObjectDeployed
DeploymentEnvironment < ObjectTop Level Namespace
DeprecationHelperTop Level Namespace
- WarningLevel < StructDeprecationHelper
Descriptor < ApplicationRecordTop Level Namespace
DescriptorJavascriptHelperTop Level Namespace
DilutionPlate < PlateTop Level Namespace
DilutionPlatePurpose < PlatePurposeTop Level Namespace
Document < ApplicationRecordTop Level Namespace
- AssociationsDocument
DocumentsController < ApplicationControllerTop Level Namespace
DriverFilesController < ApplicationControllerTop Level Namespace
EgaAccessionService < AccessionServiceTop Level Namespace
EnaAccessionService < AccessionServiceTop Level Namespace
EndpointsTop Level Namespace
- AssetAudits < BaseEndpoints
- AssetGroups < BaseEndpoints
- Assets < BaseEndpoints
- BaitLibraryLayouts < BaseEndpoints
- BarcodePrinters < BaseEndpoints
- Batches < BaseEndpoints
- BulkTransfers < BaseEndpoints
- Comments < BaseEndpoints
- CustomMetadatumCollections < BaseEndpoints
- DilutionPlatePurposes < PlatePurposesEndpoints
- ExtractionAttributes < BaseEndpoints
- Lanes < BaseEndpoints
- LibraryCreationRequests < RequestsEndpoints
- LibraryEvents < BaseEndpoints
- LibraryTubes < TubesEndpoints
- LotTypes < BaseEndpoints
- Lots < BaseEndpoints
- MultiplexedLibraryCreationRequests < LibraryCreationRequestsEndpoints
- MultiplexedLibraryTubes < LibraryTubesEndpoints
- OrderTemplates < BaseEndpoints
- Orders < BaseEndpoints
- Pipelines < BaseEndpoints
- PlateConversions < BaseEndpoints
- PlateCreations < BaseEndpoints
- PlatePurposes < BaseEndpoints
- PlateTemplates < BaseEndpoints
- Plates < BaseEndpoints
- PooledPlateCreations < BaseEndpoints
- Projects < BaseEndpoints
- QcDecisions < BaseEndpoints
- QcFiles < BaseEndpoints
- QcableCreators < BaseEndpoints
- Qcables < BaseEndpoints
- ReferenceGenomes < BaseEndpoints
- RequestTypes < BaseEndpoints
- Requests < BaseEndpoints
- Robots < BaseEndpoints
- SampleManifests < BaseEndpoints
- SampleTubes < TubesEndpoints
- Samples < BaseEndpoints
- Searches < BaseEndpoints
  - SearchActionsEndpoints::Searches
- SequencingRequests < RequestsEndpoints
- SpecificTubeCreations < BaseEndpoints
- Stamps < BaseEndpoints
- StateChanges < BaseEndpoints
- Studies < BaseEndpoints
- SubmissionPools < BaseEndpoints
- Submissions < BaseEndpoints
- Suppliers < BaseEndpoints
- Tag2LayoutTemplates < BaseEndpoints
- Tag2Layouts < BaseEndpoints
- TagGroups < BaseEndpoints
- TagLayoutTemplates < BaseEndpoints
- TagLayouts < BaseEndpoints
- TransferRequestCollections < BaseEndpoints
- TransferRequests < BaseEndpoints
- TransferTemplates < BaseEndpoints
- Transfers < BaseEndpoints
- TubeCreations < BaseEndpoints
- TubeFromTubeCreations < BaseEndpoints
- Tubes < BaseEndpoints
- Users < BaseEndpoints
- Uuids < BaseEndpoints
  - ResponseEndpoints::Uuids
  - Search < ObjectEndpoints::Uuids
    - CriteriaInvalid < ErrorEndpoints::Uuids::Search
- VolumeUpdates < BaseEndpoints
- Wells < BaseEndpoints
- WorkCompletions < BaseEndpoints
Endpoints::Tube::Purposes < BaseEndpoints::Tube
Equipment < ApplicationRecordTop Level Namespace
Event < ApplicationRecordTop Level Namespace
- AssetSetQcStateEvent < EventEvent
- LabwareFailedEvent < EventEvent
- PlateCreationEvent < EventEvent
- PlateEventsEvent
- RequestDescriptorUpdateEventEvent
- SampleLogisticsQcEvent < EventEvent
- SampleManifestEvent < EventEvent
- ScannedIntoLabEvent < EventEvent
- SequenomLoading < EventEvent
EventFactory < ObjectTop Level Namespace
EventSender < ObjectTop Level Namespace
EventfulMailer < BaseTop Level Namespace
EventfulRecordTop Level Namespace
EventsController < ApplicationControllerTop Level Namespace
ExtendedValidator < ApplicationRecordTop Level Namespace
- RequestTypeExtendedValidator < ApplicationRecordExtendedValidator
- SpeciesValidatorExtendedValidator
ExternalLibraryCreationRequest < SystemRequestTop Level Namespace
ExternalProperty < ApplicationRecordTop Level Namespace
ExternalReleaseEvent < EventTop Level Namespace
ExtractionAttribute < ApplicationRecordTop Level Namespace
- SampleTubeNotExists < StandardErrorExtractionAttribute
- WellAlreadyHasSample < StandardErrorExtractionAttribute
- WellNotExists < StandardErrorExtractionAttribute
FacultySponsor < ApplicationRecordTop Level Namespace
- AssociationsFacultySponsor
Failure < ApplicationRecordTop Level Namespace
FieldInfo < ObjectTop Level Namespace
- NullFieldInfoFieldInfo
FieldInfosHelperTop Level Namespace
FlashTruncationTop Level Namespace
FlexibleCherrypickPipeline < CherrypickForPulldownPipelineTop Level Namespace
FlexibleSubmission < OrderTop Level Namespace
FluidigmFile < ObjectTop Level Namespace
- Assay < ObjectFluidigmFile
- FinderFluidigmFile
  - Directory < ObjectFluidigmFile::Finder
  - Irods < ObjectFluidigmFile::Finder
- FluidigmWell < ObjectFluidigmFile
- InvalidFile < StandardErrorFluidigmFile
FluidigmTemplateTask < PlateTemplateTaskTop Level Namespace
FontawesomeHelperTop Level Namespace
Fragment < LabwareTop Level Namespace
GelDilutionPlate < WorkingDilutionPlateTop Level Namespace
GelsController < ApplicationControllerTop Level Namespace
GenerateCreateAssetRequestsJob < StructTop Level Namespace
GenotypingPipeline < PipelineTop Level Namespace
GenotypingRequest < CustomerRequestTop Level Namespace
GetYourQcCompletedTubesHereController < ApplicationControllerTop Level Namespace
HasBehaviourTop Level Namespace
- ClassMethodsHasBehaviour
Health < ObjectTop Level Namespace
HealthController < ApplicationControllerTop Level Namespace
HeronTop Level Namespace
- FactoriesHeron
  - ConcernsHeron::Factories
    - ContentsHeron::Factories::Concerns
    - CoordinatesSupportHeron::Factories::Concerns
    - EventfulHeron::Factories::Concerns
    - ForeignBarcodesHeron::Factories::Concerns
    - RecipientsHeron::Factories::Concerns
    - RecipientsCoordinatesHeron::Factories::Concerns
  - Event < ObjectHeron::Factories
  - Plate < ObjectHeron::Factories
  - PlateFromRack < ObjectHeron::Factories
  - Sample < ObjectHeron::Factories
  - Tube < ObjectHeron::Factories
  - TubeRack < ObjectHeron::Factories
  - TubeRackStatus < ObjectHeron::Factories
HiSeqSequencingRequest < SequencingRequestTop Level Namespace
HomesController < ApplicationControllerTop Level Namespace
HttpLoginProxy < BaseLoginProxyTop Level Namespace
Identifier < ApplicationRecordTop Level Namespace
IllegalOperation < RuntimeErrorTop Level Namespace
IlluminaB::RequestsIlluminaB
- StdLibraryRequest < LibraryCreationIlluminaB::Requests
IlluminaC::HelperIlluminaC
- TemplateConstructor < ObjectIlluminaC::Helper
IlluminaC::RequestsIlluminaC
- LibraryRequest < LibraryCreationIlluminaC::Requests
- NoPcrLibraryRequest < LibraryRequestIlluminaC::Requests
- PcrLibraryRequest < LibraryRequestIlluminaC::Requests
IlluminaHtp::InitialStockTubePurpose < StockTubePurposeIlluminaHtp
IlluminaHtp::MxTubePurpose < PurposeIlluminaHtp
IlluminaHtp::RequestsIlluminaHtp
- GbsRequest < StdLibraryRequestIlluminaHtp::Requests
- HeronRequest < StdLibraryRequestIlluminaHtp::Requests
- HeronTailedRequest < StdLibraryRequestIlluminaHtp::Requests
- LibraryCompletion < StdLibraryRequestIlluminaHtp::Requests
  - FailUpstreamIlluminaHtp::Requests::LibraryCompletion
- SharedLibraryPrep < StdLibraryRequestIlluminaHtp::Requests
- StdLibraryRequest < LibraryCreationIlluminaHtp::Requests
IlluminaHtp::StockTubePurpose < PurposeIlluminaHtp
Implement < ApplicationRecordTop Level Namespace
InformaticsTop Level Namespace
- Application < ObjectInformatics
- GlobalsInformatics
- SupportInformatics
  - Options < ObjectInformatics::Support
- ViewInformatics
  - MenuInformatics::View
    - Item < ObjectInformatics::View::Menu
    - List < ObjectInformatics::View::Menu
  - TabsInformatics::View
    - Item < ObjectInformatics::View::Tabs
    - List < ObjectInformatics::View::Tabs
IoTop Level Namespace
- Aliquot < BaseIo
- Array < ObjectIo
- Asset < BaseIo
- AssetAudit < BaseIo
  - ApiIoSupportIo::AssetAudit
- AssetGroup < BaseIo
- BaitLibrary < BaseIo
- BaitLibraryLayout < BaseIo
- BarcodePrinter < BaseIo
- Batch < BaseIo
- BulkTransfer < BaseIo
- Comment < BaseIo
- CustomMetadatumCollection < BaseIo
- DilutionPlatePurpose < PlatePurposeIo
- ExtractionAttribute < BaseIo
- Labware < BaseIo
- Lane < AssetIo
- LibraryCreationRequest < RequestIo
- LibraryEvent < BaseIo
- LibraryTube < TubeIo
- Lot < BaseIo
- LotType < BaseIo
- MultiplexedLibraryCreationRequest < LibraryCreationRequestIo
- MultiplexedLibraryTube < LibraryTubeIo
- Order < BaseIo
- PacBioLibraryTube < AssetIo
- Pipeline < BaseIo
- Plate < BaseIo
- PlateConversion < BaseIo
- PlateCreation < BaseIo
- PlatePurpose < BaseIo
- PlateTemplate < BaseIo
- PooledPlateCreation < BaseIo
- Project < BaseIo
- Purpose < BaseIo
- QcDecision < BaseIo
- QcFile < BaseIo
- Qcable < BaseIo
- QcableCreator < BaseIo
- Receptacle < BaseIo
- ReferenceGenome < BaseIo
- Request < BaseIo
- RequestType < BaseIo
- Robot < BaseIo
- Sample < BaseIo
- SampleManifest < BaseIo
- SampleTube < TubeIo
- Search < BaseIo
- SequencingRequest < RequestIo
- SpecificTubeCreation < BaseIo
- Stamp < BaseIo
- StateChange < BaseIo
- StockMultiplexedLibraryTube < TubeIo
- Study < BaseIo
- Submission < BaseIo
- SubmissionPool < BaseIo
- SubmissionTemplate < BaseIo
- Supplier < BaseIo
  - ApiIoSupportIo::Supplier
- Tag2Layout < BaseIo
- Tag2LayoutTemplate < BaseIo
- TagGroup < BaseIo
- TagLayout < BaseIo
- TagLayoutTemplate < BaseIo
- Transfer < BaseIo
  - BetweenPlates < BaseIo::Transfer
  - BetweenPlatesBySubmission < BaseIo::Transfer
  - BetweenSpecificTubes < BaseIo::Transfer
  - BetweenTubesBySubmission < BaseIo::Transfer
  - FromPlateToSpecificTubes < BaseIo::Transfer
  - FromPlateToSpecificTubesByPool < BaseIo::Transfer
  - FromPlateToTube < BaseIo::Transfer
  - FromPlateToTubeByMultiplex < BaseIo::Transfer
  - FromPlateToTubeBySubmission < BaseIo::Transfer
- TransferRequest < BaseIo
- TransferRequestCollection < BaseIo
- TransferTemplate < BaseIo
- Tube < AssetIo
  - Purpose < BaseIo::Tube
- TubeCreation < BaseIo
- TubeFromTubeCreation < BaseIo
- User < BaseIo
- VolumeUpdate < BaseIo
- Well < BaseIo
- WorkCompletion < BaseIo
Io::ActiveRecord::Relation < ObjectIo::ActiveRecord
Io::Endpoints::Uuids::Search < ObjectIo::Endpoints::Uuids
Item < ApplicationRecordTop Level Namespace
LabEvent < ApplicationRecordTop Level Namespace
LabSearchesController < ApplicationControllerTop Level Namespace
LabWhereClientTop Level Namespace
- Endpoint < ObjectLabWhereClient
- EndpointCreateActionsLabWhereClient
  - ClassMethodsLabWhereClient::EndpointCreateActions
- EndpointUpdateActionsLabWhereClient
  - ClassMethodsLabWhereClient::EndpointUpdateActions
- LabWhere < ObjectLabWhereClient
- Labware < EndpointLabWhereClient
- LabwareSearch < EndpointLabWhereClient
- Location < EndpointLabWhereClient
- LocationType < EndpointLabWhereClient
- Scan < EndpointLabWhereClient
LabelPrinterTop Level Namespace
- LabelLabelPrinter
  - AssetPlate < BasePlateLabelPrinter::Label
  - AssetPlateDouble < BasePlateDoubleLabelPrinter::Label
  - AssetRedirect < ObjectLabelPrinter::Label
  - AssetTube < BaseTubeLabelPrinter::Label
  - BasePlate < ObjectLabelPrinter::Label
  - BasePlateDouble < ObjectLabelPrinter::Label
  - BaseTube < ObjectLabelPrinter::Label
  - BatchMultiplex < BaseTubeLabelPrinter::Label
  - BatchPlate < BasePlateLabelPrinter::Label
  - BatchPlateDouble < BasePlateDoubleLabelPrinter::Label
  - BatchPlatesLabelPrinter::Label
  - BatchRedirect < ObjectLabelPrinter::Label
  - BatchTube < BaseTubeLabelPrinter::Label
  - MultipleDoubleLabelsLabelPrinter::Label
  - MultipleLabelsLabelPrinter::Label
  - MultiplexedTube < BaseTubeLabelPrinter::Label
  - PlateCreator < BasePlateLabelPrinter::Label
  - PlateToTubes < BaseTubeLabelPrinter::Label
  - RobotBeds < BasePlateLabelPrinter::Label
  - SampleManifestMultiplex < BaseTubeLabelPrinter::Label
  - SampleManifestPlate < BasePlateLabelPrinter::Label
  - SampleManifestPlateDouble < BasePlateDoubleLabelPrinter::Label
  - SampleManifestRedirect < ObjectLabelPrinter::Label
  - SampleManifestTube < BaseTubeLabelPrinter::Label
- PmbClient < ObjectLabelPrinter
- PrintJob < ObjectLabelPrinter
Labware < AssetTop Level Namespace
- CommentsController < ApplicationControllerLabware
LabwareController < ApplicationControllerTop Level Namespace
LabwhereReception < ObjectTop Level Namespace
LabwhereReceptionsController < ApplicationControllerTop Level Namespace
Lane < ReceptacleTop Level Namespace
- Labware < LabwareLane
Latin1Validator < EachValidatorTop Level Namespace
LegacyPipeline < PipelineTop Level Namespace
LibPoolNormTubeGenerator < ObjectTop Level Namespace
LibraryCreationPipeline < PipelineTop Level Namespace
LibraryCreationRequest < CustomerRequestTop Level Namespace
- Metadata < BaseLibraryCreationRequest
LibraryEvent < BroadcastEventTop Level Namespace
LibraryTube < TubeTop Level Namespace
LibraryType < ApplicationRecordTop Level Namespace
LibraryTypesRequestType < ApplicationRecordTop Level Namespace
Limber::HelperLimber
- LibraryAndMultiplexingTemplateConstructor < TemplateConstructorLimber::Helper
- LibraryOnlyTemplateConstructor < TemplateConstructorLimber::Helper
- RequestTypeConstructor < ObjectLimber::Helper
- TemplateConstructor < ObjectLimber::Helper
LinearSubmission < OrderTop Level Namespace
LinefeedFixTop Level Namespace
LocationReport < ApplicationRecordTop Level Namespace
- LocationReportForm < ObjectLocationReport
LocationReportJob < StructTop Level Namespace
LocationReportsController < ApplicationControllerTop Level Namespace
Lot < ApplicationRecordTop Level Namespace
- TemplateLot
LotType < ApplicationRecordTop Level Namespace
MachineBarcodesController < ApplicationControllerTop Level Namespace
ManifestUtilTop Level Namespace
Map < ApplicationRecordTop Level Namespace
- CoordinateMap
- SequentialMap
Messenger < ApplicationRecordTop Level Namespace
MessengerCreator < ApplicationRecordTop Level Namespace
- SelfFinder < ObjectMessengerCreator
- WellFinder < ObjectMessengerCreator
MessengersController < ApplicationControllerTop Level Namespace
MetadataTop Level Namespace
- AccessionedTag < ObjectMetadata
- Base < ApplicationRecordMetadata
- BuilderBase < FormBuilderMetadata
- FormBuilder < BuilderBaseMetadata
- Metadata < BaseMetadata
- Section < StructMetadata
- ViewBuilder < BuilderBaseMetadata
MiSeqSequencingRequest < SequencingRequestTop Level Namespace
MigrationExtensions::DbTableArchiverMigrationExtensions
MigrationExtensions::EncodingChangesMigrationExtensions
ModelExtensions::AssetGroupModelExtensions
ModelExtensions::BaitLibraryLayoutModelExtensions
ModelExtensions::BarcodePrinterModelExtensions
ModelExtensions::LibraryTubeModelExtensions
ModelExtensions::MultiplexedLibraryTubeModelExtensions
ModelExtensions::OrderModelExtensions
- NonNilHash < ObjectModelExtensions::Order
- RequestOptionForValidation < OpenStructModelExtensions::Order
- ValidationsModelExtensions::Order
ModelExtensions::PlateModelExtensions
- NamedScopeHelpersModelExtensions::Plate
ModelExtensions::ProjectModelExtensions
ModelExtensions::RequestModelExtensions
ModelExtensions::RobotModelExtensions
ModelExtensions::SampleModelExtensions
ModelExtensions::SampleManifestModelExtensions
ModelExtensions::SampleTubeModelExtensions
ModelExtensions::StampModelExtensions
ModelExtensions::StudyModelExtensions
ModelExtensions::SubmissionModelExtensions
ModelExtensions::TagLayoutModelExtensions
ModelExtensions::TubeModelExtensions
ModelExtensions::WellModelExtensions
MovieLengthTask < TaskTop Level Namespace
MultiplexedCherrypickingTask < TaskTop Level Namespace
MultiplexedLibraryCreationPipeline < LibraryCreationPipelineTop Level Namespace
MultiplexedLibraryCreationRequest < LibraryCreationRequestTop Level Namespace
MultiplexedLibraryTube < TubeTop Level Namespace
NestedValidationTop Level Namespace
- NestedValidator < EachValidatorNestedValidation
NoAccessionService < AccessionServiceTop Level Namespace
NpgActions::AssetsController < ApplicationControllerNpgActions
NullCustomMetadatumCollection < ObjectTop Level Namespace
ObjectSpaceProfile < ObjectTop Level Namespace
OligoEnumerator < ObjectTop Level Namespace
Order < ApplicationRecordTop Level Namespace
OrderCompatibilityValidator < ValidatorTop Level Namespace
- OrderRequestTypes < ObjectOrderCompatibilityValidator
OrderPresenter < ObjectTop Level Namespace
OrderRole < ApplicationRecordTop Level Namespace
OrdersController < ApplicationControllerTop Level Namespace
PacBio::SampleSheet < ObjectPacBio
PacBio::Worksheet < ObjectPacBio
PacBioLibraryTube < TubeTop Level Namespace
- Metadata < BasePacBioLibraryTube
PacBioSamplePrepPipeline < PipelineTop Level Namespace
PacBioSamplePrepRequest < CustomerRequestTop Level Namespace
- Metadata < BasePacBioSamplePrepRequest
- RequestOptionsValidator < ValidatorPacBioSamplePrepRequest
PacBioSequencingPipeline < PipelineTop Level Namespace
PacBioSequencingRequest < CustomerRequestTop Level Namespace
- Metadata < BasePacBioSequencingRequest
- RequestOptionsValidator < ValidatorPacBioSequencingRequest
ParentsController < ApplicationControllerTop Level Namespace
ParsersTop Level Namespace
- BioanalysisCsvParser < ObjectParsers
  - InvalidFile < StandardErrorParsers::BioanalysisCsvParser
- DilutionParser < ObjectParsers
- PlateReaderParser < ObjectParsers
  - InvalidFile < StandardErrorParsers::PlateReaderParser
- QuantParser < ObjectParsers
  - InvalidFile < StandardErrorParsers::QuantParser
Permission < ApplicationRecordTop Level Namespace
PhiXTop Level Namespace
- SpikedBuffer < ObjectPhiX
- SpikedBuffersController < ApplicationControllerPhiX
- Stock < ObjectPhiX
- StocksController < ApplicationControllerPhiX
PhiXesController < ApplicationControllerTop Level Namespace
PickList < ApplicationRecordTop Level Namespace
- Pick < ObjectPickList
- RecordCache < ObjectPickList
  - ByLabware < RecordCachePickList::RecordCache
  - ByReceptacle < RecordCachePickList::RecordCache
PickListJob < StructTop Level Namespace
PickListsController < ApplicationControllerTop Level Namespace
PicoAssayPlate < PlateTop Level Namespace
PicoDilutionPlate < DilutionPlateTop Level Namespace
Pipeline < ApplicationRecordTop Level Namespace
- BatchValidationPipeline
- GroupByParentPipeline
- GrouperByParent < GrouperForPipelinePipeline
- GrouperByParentAndSubmission < GrouperForPipelinePipeline
- GrouperBySubmission < GrouperForPipelinePipeline
- GrouperForPipeline < ObjectPipeline
- InboxExtensionsPipeline
- InboxGroupedBySubmissionPipeline
- RequestsInStoragePipeline
PipelineRequestInformationType < ApplicationRecordTop Level Namespace
PipelinesController < ApplicationControllerTop Level Namespace
PipelinesHelperTop Level Namespace
PipelinesRequestType < ApplicationRecordTop Level Namespace
Plate < LabwareTop Level Namespace
- Creator < ApplicationRecordPlate
  - ParentPurposeRelationship < ApplicationRecordPlate::Creator
  - PurposeRelationship < ApplicationRecordPlate::Creator
- CreatorParameters < ObjectPlate
- FluidigmBehaviourPlate
  - FluidigmError < StandardErrorPlate::FluidigmBehaviour
- QuadCreator < ObjectPlate
- SampleTubeFactory < SimpleDelegatorPlate
PlateBarcode < BaseTop Level Namespace
- MockBarcode < StructPlateBarcode
PlateConversion < ApplicationRecordTop Level Namespace
PlateCreation < AssetCreationTop Level Namespace
- ChildrenPlateCreation
- CreationChildPlateCreation
PlateMapGeneration < ObjectTop Level Namespace
PlateOwner < ApplicationRecordTop Level Namespace
PlatePicksTop Level Namespace
- BatchesJson < ObjectPlatePicks
PlatePicksController < ApplicationControllerTop Level Namespace
PlatePurpose < PurposeTop Level Namespace
- InitialPurpose < PlatePurposePlatePurpose
- Input < PlatePurposePlatePurpose
PlateSummariesController < ApplicationControllerTop Level Namespace
PlateTemplate < PlateTop Level Namespace
PlateTemplateTask < TaskTop Level Namespace
- SpreadsheetReader < ObjectPlateTemplateTask
PlateTemplatesController < ApplicationControllerTop Level Namespace
PlateTransferTask < TaskTop Level Namespace
PlateType < ApplicationRecordTop Level Namespace
PlateVolume < ApplicationRecordTop Level Namespace
PlatesController < ApplicationControllerTop Level Namespace
PlatesHelperTop Level Namespace
- AliquotError < StandardErrorPlatesHelper
PolymorphicUploader < BaseTop Level Namespace
PooledCherrypickRequest < CustomerRequestTop Level Namespace
PooledPlateCreation < AssetCreationTop Level Namespace
- ParentAssociation < ApplicationRecordPooledPlateCreation
Pooling < ObjectTop Level Namespace
- TagClashReport < SimpleDelegatorPooling
  - Clash < StructPooling::TagClashReport
  - ClashInfo < StructPooling::TagClashReport
PoolingsController < ApplicationControllerTop Level Namespace
Postman < ObjectTop Level Namespace
- Channel < ObjectPostman
- ConnectionMissing < StatementInvalidPostman
- Message < ObjectPostman
- StateMachinePostman
  - HelperPostman::StateMachine
PreCapturePool < ApplicationRecordTop Level Namespace
- Builder < ObjectPreCapturePool
- PoolablePreCapturePool
- PooledRequest < ApplicationRecordPreCapturePool
PrepKitBarcodeTask < TaskTop Level Namespace
PresentersTop Level Namespace
- BatchSubmenuPresenter < ObjectPresenters
- GroupLinePresenter < ObjectPresenters
- GroupedPipelineInboxPresenter < ObjectPresenters
- QcReportPresenter < ObjectPresenters
PrimerPanel < ApplicationRecordTop Level Namespace
Product < ApplicationRecordTop Level Namespace
ProductCatalogue < ApplicationRecordTop Level Namespace
- LibraryDriven < ObjectProductCatalogue
- Manual < ObjectProductCatalogue
- SingleProduct < ObjectProductCatalogue
ProductCriteria < ApplicationRecordTop Level Namespace
- Advanced < BasicProductCriteria
- Basic < ObjectProductCriteria
  - Comparison < StructProductCriteria::Basic
ProductHelpersTop Level Namespace
ProductLine < ApplicationRecordTop Level Namespace
ProductProductCatalogue < ApplicationRecordTop Level Namespace
Program < ApplicationRecordTop Level Namespace
- AssociationsProgram
ProgramsValidator < EachValidatorTop Level Namespace
Project < ApplicationRecordTop Level Namespace
- Metadata < BaseProject
ProjectManager < ApplicationRecordTop Level Namespace
- AssociationsProjectManager
ProjectsController < ApplicationControllerTop Level Namespace
PrototypeReplacementHelperTop Level Namespace
PsdFormatter < FormatterTop Level Namespace
Pulldown::PlatePurposesPulldown
Pulldown::RequestsPulldown
- BaitLibraryRequestPulldown::Requests
  - BaitMetadataPulldown::Requests::BaitLibraryRequest
- IscLibraryRequest < LibraryCreationPulldown::Requests
- IscLibraryRequestPart < IscLibraryRequestPulldown::Requests
- LibraryCreation < LibraryCreationPulldown::Requests
- ReIscLibraryRequest < IscLibraryRequestPulldown::Requests
- ScLibraryRequest < LibraryCreationPulldown::Requests
- WgsLibraryRequest < LibraryCreationPulldown::Requests
PulldownMultiplexedLibraryCreationRequest < CustomerRequestTop Level Namespace
PulldownMultiplexedLibraryTube < TubeTop Level Namespace
Purpose < ApplicationRecordTop Level Namespace
- Relationship < ApplicationRecordPurpose
  - AssociationsPurpose::Relationship
QcAssay < ApplicationRecordTop Level Namespace
QcDecision < ApplicationRecordTop Level Namespace
- QcDecisionQcable < ApplicationRecordQcDecision
QcFile < ApplicationRecordTop Level Namespace
- AssociationsQcFile
QcFilesController < ApplicationControllerTop Level Namespace
QcMetric < ApplicationRecordTop Level Namespace
- QcStateQcMetric
  - State < StructQcMetric::QcState
QcMetricRequest < ApplicationRecordTop Level Namespace
QcReport < ApplicationRecordTop Level Namespace
- File < ObjectQcReport
- ReportBehaviourQcReport
- StateMachineQcReport
  - ClassMethodsQcReport::StateMachine
QcReportJob < StructTop Level Namespace
QcReportsController < ApplicationControllerTop Level Namespace
QcRequest < CustomerRequestTop Level Namespace
QcResult < ApplicationRecordTop Level Namespace
QcResultFactory < ObjectTop Level Namespace
- Resource < ObjectQcResultFactory
QcTube < MultiplexedLibraryTubeTop Level Namespace
Qcable < ApplicationRecordTop Level Namespace
- StatemachineQcable
QcableCreator < ApplicationRecordTop Level Namespace
QcableLibraryPlatePurpose < PlatePurposeTop Level Namespace
QcablePlatePurpose < PlatePurposeTop Level Namespace
QcableTubePurpose < PurposeTop Level Namespace
QuadStampController < ApplicationControllerTop Level Namespace
RackedTube < ApplicationRecordTop Level Namespace
ReRequestSubmission < OrderTop Level Namespace
Receptacle < AssetTop Level Namespace
- Qc < ReceptacleReceptacle
Receptacles::CommentsController < ApplicationControllerReceptacles
ReceptaclesController < ApplicationControllerTop Level Namespace
RecordLoaderTop Level Namespace
- ApplicationRecordLoader < BaseRecordLoader
- BarcodePrinterTypeLoader < ApplicationRecordLoaderRecordLoader
- PlatePurposeLoader < ApplicationRecordLoaderRecordLoader
- PlateTypeLoader < ApplicationRecordLoaderRecordLoader
- PrimerPanelLoader < ApplicationRecordLoaderRecordLoader
- RequestTypeLoader < ApplicationRecordLoaderRecordLoader
- RobotLoader < ApplicationRecordLoaderRecordLoader
- RobotPropertyLoader < ApplicationRecordLoaderRecordLoader
- TagGroupAdapterTypeLoader < ApplicationRecordLoaderRecordLoader
- TagGroupLoader < ApplicationRecordLoaderRecordLoader
- TagLayoutTemplatesLoader < ApplicationRecordLoaderRecordLoader
- TubePurposeLoader < ApplicationRecordLoaderRecordLoader
ReferenceGenome < ApplicationRecordTop Level Namespace
- AssociationsReferenceGenome
ReferenceGenomesController < ApplicationControllerTop Level Namespace
ReportFail < ObjectTop Level Namespace
ReportFailsController < ApplicationControllerTop Level Namespace
ReportFailsHelperTop Level Namespace
Request < ApplicationRecordTop Level Namespace
- AccessioningRequiredRequest
- AutoMultiplexing < MultiplexingRequest
- ChangeDecision < ObjectRequest
  - ChangeDecisionError < StandardErrorRequest::ChangeDecision
- CustomerResponsibilityRequest
- GroupingHelpersRequest
- HasNoTargetAssetRequest
- HasPrimerPanelRequest
- LibraryCreation < CustomerRequestRequest
  - Metadata < BaseRequest::LibraryCreation
- LibraryManufactureRequest
  - ClassMethodsRequest::LibraryManufacture
- Multiplexing < CustomerRequestRequest
- None < ObjectRequest
- StatemachineRequest
- StatisticsRequest
  - Counter < ObjectRequest::Statistics
  - Summary < ObjectRequest::Statistics
- TractionRequest
  - GridIon < CustomerRequestRequest::Traction
    - Metadata < BaseRequest::Traction::GridIon
RequestClassDeprecatorTop Level Namespace
- Request < ApplicationRecordRequestClassDeprecator
RequestEvent < ApplicationRecordTop Level Namespace
RequestFactory < ObjectTop Level Namespace
RequestInformation < ApplicationRecordTop Level Namespace
RequestInformationType < ApplicationRecordTop Level Namespace
RequestType < ApplicationRecordTop Level Namespace
- DeprecatedError < RuntimeErrorRequestType
- PoolingMethod < ApplicationRecordRequestType
  - PlateRowRequestType::PoolingMethod
  - SubmissionRequestType::PoolingMethod
- RequestTypePlatePurpose < ApplicationRecordRequestType
- ValidationRequestType
  - RequestTypeValidator < ValidatorRequestType::Validation
- Validator < ApplicationRecordRequestType
  - ArrayWithDefault < ObjectRequestType::Validator
  - LibraryTypeValidator < ObjectRequestType::Validator
  - NullValidator < ObjectRequestType::Validator
RequestTypePurposeCreationTop Level Namespace
RequestTypesHelperTop Level Namespace
Requests::CommentsController < ApplicationControllerRequests
RequestsController < ApplicationControllerTop Level Namespace
RequestsHelperTop Level Namespace
Robot < ApplicationRecordTop Level Namespace
- GeneratorRobot
  - Base < ObjectRobot::Generator
  - Beckman < HamiltonRobot::Generator
  - Hamilton < BaseRobot::Generator
  - Tecan < BaseRobot::Generator
- PickData < ObjectRobot
- VerificationRobot
  - Base < ObjectRobot::Verification
  - SourceDestBeds < BaseRobot::Verification
  - SourceDestControlBeds < BaseRobot::Verification
RobotProperty < ApplicationRecordTop Level Namespace
RobotVerificationsController < ApplicationControllerTop Level Namespace
Role < ApplicationRecordTop Level Namespace
- AuthorizedRole
- UserRole < ApplicationRecordRole
- UserRoleHelperRole
Sample < ApplicationRecordTop Level Namespace
- Metadata < ObjectSample
SampleAccessioningJob < StructTop Level Namespace
SampleJob < ApplicationRecordTop Level Namespace
SampleLogisticsController < ApplicationControllerTop Level Namespace
SampleManifest < ApplicationRecordTop Level Namespace
- AssociationsSampleManifest
- BarcodePrinterBehaviourSampleManifest
- CoreBehaviourSampleManifest
  - LibraryAssetsSampleManifest::CoreBehaviour
  - NoSpecializedValidationSampleManifest::CoreBehaviour
  - SharedSampleManifest::CoreBehaviour
  - StockAssetsSampleManifest::CoreBehaviour
- Generator < ObjectSampleManifest
- LibraryPlateBehaviourSampleManifest
  - Core < BaseSampleManifest::LibraryPlateBehaviour
- LibraryTubeBehaviourSampleManifest
  - Core < BaseSampleManifest::LibraryTubeBehaviour
- MultiplexedLibraryBehaviourSampleManifest
  - Core < BaseSampleManifest::MultiplexedLibraryBehaviour
- PlateBehaviourSampleManifest
  - Base < ObjectSampleManifest::PlateBehaviour
  - Core < BaseSampleManifest::PlateBehaviour
- SampleTubeBehaviourSampleManifest
  - Core < BaseSampleManifest::SampleTubeBehaviour
- SharedTubeBehaviourSampleManifest
  - Base < ObjectSampleManifest::SharedTubeBehaviour
- StateMachineSampleManifest
- TubeRackBehaviourSampleManifest
  - Core < BaseSampleManifest::TubeRackBehaviour
- UnspecifiedBehaviourSampleManifest
  - Core < ObjectSampleManifest::UnspecifiedBehaviour
- Uploader < ObjectSampleManifest
SampleManifestAsset < ApplicationRecordTop Level Namespace
SampleManifestExcelTop Level Namespace
- Configuration < ConfigurationSampleManifestExcel
- Download < ObjectSampleManifestExcel
- ManifestTypeList < ObjectSampleManifestExcel
  - ManifestType < ObjectSampleManifestExcel::ManifestTypeList
- TagsSampleManifestExcel
  - AliquotUpdaterSampleManifestExcel::Tags
    - ClassMethodsSampleManifestExcel::Tags::AliquotUpdater
  - ClashesFinderSampleManifestExcel::Tags
  - ExampleData < ObjectSampleManifestExcel::Tags
  - ValidatorSampleManifestExcel::Tags
    - FormattingSampleManifestExcel::Tags::Validator
    - UniquenessSampleManifestExcel::Tags::Validator
- TestDownload < ObjectSampleManifestExcel
- UploadSampleManifestExcel
  - Base < ObjectSampleManifestExcel::Upload
  - Cache < ObjectSampleManifestExcel::Upload
  - ConvertersSampleManifestExcel::Upload
  - Data < ObjectSampleManifestExcel::Upload
  - ProcessorSampleManifestExcel::Upload
    - Base < ObjectSampleManifestExcel::Upload::Processor
    - LibraryTube < BaseSampleManifestExcel::Upload::Processor
    - MultiplexedLibraryTube < BaseSampleManifestExcel::Upload::Processor
    - OneDTube < BaseSampleManifestExcel::Upload::Processor
    - Plate < BaseSampleManifestExcel::Upload::Processor
    - TubeRack < BaseSampleManifestExcel::Upload::Processor
  - Row < ObjectSampleManifestExcel::Upload
  - Rows < ObjectSampleManifestExcel::Upload
- WorksheetSampleManifestExcel
  - DataWorksheet < BaseSampleManifestExcel::Worksheet
  - TestWorksheet < BaseSampleManifestExcel::Worksheet
SampleManifestUploadWithTagSequencesController < ApplicationControllerTop Level Namespace
SamplePrepQcTask < TaskTop Level Namespace
SampleTube < TubeTop Level Namespace
Samples::CommentsController < ApplicationControllerSamples
Samples::StudiesController < ApplicationControllerSamples
SamplesController < ApplicationControllerTop Level Namespace
SamplesHelperTop Level Namespace
SangerSampleId < ApplicationRecordTop Level Namespace
- Factory < ObjectSangerSampleId
Sdb::BaseController < ApplicationControllerSdb
Sdb::HomeController < BaseControllerSdb
Sdb::SampleManifestsController < BaseControllerSdb
Sdb::SampleManifestsHelperSdb
Sdb::SuppliersController < BaseControllerSdb
Search < ApplicationRecordTop Level Namespace
- DeprecatedSearch < SearchSearch
- FindAssetByBarcode < SearchSearch
- FindIlluminaAPlates < DeprecatedSearchSearch
- FindIlluminaAStockPlates < DeprecatedSearchSearch
- FindIlluminaBPlates < DeprecatedSearchSearch
- FindIlluminaBPlatesForUser < DeprecatedSearchSearch
- FindIlluminaBStockPlates < DeprecatedSearchSearch
- FindIlluminaCPlates < DeprecatedSearchSearch
- FindIlluminaCTubes < DeprecatedSearchSearch
- FindLotByBatchId < SearchSearch
- FindLotByLotNumber < SearchSearch
- FindModelByName < SearchSearch
- FindOutstandingIlluminaBPrePcrPlates < SearchSearch
- FindPlates < SearchSearch
- FindPlatesForUser < SearchSearch
- FindPulldownPlates < DeprecatedSearchSearch
- FindPulldownPlatesForUser < DeprecatedSearchSearch
- FindPulldownStockPlates < DeprecatedSearchSearch
- FindQcableByBarcode < SearchSearch
- FindRobotByBarcode < SearchSearch
- FindSourceAssetsByDestinationAssetBarcode < SearchSearch
- FindTubes < SearchSearch
- FindUserByLogin < SearchSearch
- FindUserBySwipecardCode < SearchSearch
SearchBehaviourTop Level Namespace
SearchesController < ApplicationControllerTop Level Namespace
SequencescapeExcelTop Level Namespace
- Cell < ObjectSequencescapeExcel
- Column < ObjectSequencescapeExcel
  - ArgumentBuilder < ObjectSequencescapeExcel::Column
- ColumnList < ObjectSequencescapeExcel
- ConditionalFormatting < ObjectSequencescapeExcel
- ConditionalFormattingDefault < ObjectSequencescapeExcel
- ConditionalFormattingDefaultList < ObjectSequencescapeExcel
- ConditionalFormattingList < ObjectSequencescapeExcel
- Configuration < ObjectSequencescapeExcel
  - Columns < ObjectSequencescapeExcel::Configuration
- CoreExtensionsSequencescapeExcel
  - AxlsxWorksheetSequencescapeExcel::CoreExtensions
- Download < ObjectSequencescapeExcel
- Formula < ObjectSequencescapeExcel
- HelpersSequencescapeExcel
  - AttributesSequencescapeExcel::Helpers
    - ClassMethodsSequencescapeExcel::Helpers::Attributes
  - DownloadSequencescapeExcel::Helpers
  - WorksheetSequencescapeExcel::Helpers
    - Style < ObjectSequencescapeExcel::Helpers::Worksheet
- ListSequencescapeExcel
  - ClassMethodsSequencescapeExcel::List
- NullObjectsSequencescapeExcel
  - NullColumn < ObjectSequencescapeExcel::NullObjects
  - NullColumnList < ObjectSequencescapeExcel::NullObjects
  - NullConfiguration < ObjectSequencescapeExcel::NullObjects
    - NullColumns < ObjectSequencescapeExcel::NullObjects::NullConfiguration
  - NullProcessor < ObjectSequencescapeExcel::NullObjects
- NullRange < ObjectSequencescapeExcel
- NullValidation < ObjectSequencescapeExcel
- Range < ObjectSequencescapeExcel
- RangeList < ObjectSequencescapeExcel
- SpecialisedFieldSequencescapeExcel
  - BaseSequencescapeExcel::SpecialisedField
  - ChromiumTagGroup < ObjectSequencescapeExcel::SpecialisedField
  - ChromiumTagWell < ObjectSequencescapeExcel::SpecialisedField
  - ControlType < ObjectSequencescapeExcel::SpecialisedField
  - I5 < ObjectSequencescapeExcel::SpecialisedField
  - I7 < ObjectSequencescapeExcel::SpecialisedField
  - InsertSizeFrom < ObjectSequencescapeExcel::SpecialisedField
  - InsertSizeTo < ObjectSequencescapeExcel::SpecialisedField
  - LibraryType < ObjectSequencescapeExcel::SpecialisedField
  - PrimerPanel < ObjectSequencescapeExcel::SpecialisedField
  - Priority < ObjectSequencescapeExcel::SpecialisedField
  - ReferenceGenome < ObjectSequencescapeExcel::SpecialisedField
  - SampleEbiAccessionNumber < ObjectSequencescapeExcel::SpecialisedField
  - SangerPlateId < ObjectSequencescapeExcel::SpecialisedField
  - SangerSampleId < ObjectSequencescapeExcel::SpecialisedField
  - SangerSampleIdValueSequencescapeExcel::SpecialisedField
  - SangerTubeId < ObjectSequencescapeExcel::SpecialisedField
  - Tag2Group < ObjectSequencescapeExcel::SpecialisedField
  - Tag2Index < ObjectSequencescapeExcel::SpecialisedField
  - TagGroup < ObjectSequencescapeExcel::SpecialisedField
  - TagIndex < ObjectSequencescapeExcel::SpecialisedField
  - ValueRequiredSequencescapeExcel::SpecialisedField
  - ValueToIntegerSequencescapeExcel::SpecialisedField
  - Volume < ObjectSequencescapeExcel::SpecialisedField
  - Well < ObjectSequencescapeExcel::SpecialisedField
- SubclassCheckerSequencescapeExcel
  - ClassMethodsSequencescapeExcel::SubclassChecker
- UploadSequencescapeExcel
- Validation < ObjectSequencescapeExcel
- WorksheetSequencescapeExcel
  - Base < ObjectSequencescapeExcel::Worksheet
  - DataWorksheet < BaseSequencescapeExcel::Worksheet
  - RangesWorksheet < BaseSequencescapeExcel::Worksheet
SequencingPipeline < PipelineTop Level Namespace
SequencingQcBatchTop Level Namespace
SequencingRequest < CustomerRequestTop Level Namespace
- Metadata < BaseSequencingRequest
- RequestOptionsValidator < ValidatorSequencingRequest
SequenomQcPlate < PlateTop Level Namespace
SequenomQcPlatesController < ApplicationControllerTop Level Namespace
SessionsController < ApplicationControllerTop Level Namespace
SetCharacterisationDescriptorsTask < TaskTop Level Namespace
SetDescriptorsTask < TaskTop Level Namespace
SharedBehaviourTop Level Namespace
- DeprecatableSharedBehaviour
- ImmutableSharedBehaviour
- IndestructableSharedBehaviour
- NamedSharedBehaviour
- QcableAssetSharedBehaviour
SingleReceptacleLabwareTop Level Namespace
SingleRequestSubmission < OrderTop Level Namespace
SingleSignOnTop Level Namespace
- ServerError < RuntimeErrorSingleSignOn
SpecificTubeCreation < TubeCreationTop Level Namespace
- ChildPurpose < ApplicationRecordSpecificTubeCreation
SpikedBuffer < LibraryTubeTop Level Namespace
SquishifyTop Level Namespace
Stamp < ApplicationRecordTop Level Namespace
- StampQcable < ApplicationRecordStamp
StandardNamedScopesTop Level Namespace
StateChange < ApplicationRecordTop Level Namespace
StateChangerTop Level Namespace
- Base < ObjectStateChanger
- InitialStockTube < TubeBaseStateChanger
- InputPlate < StandardPlateStateChanger
- MxTube < TubeBaseStateChanger
- QcableLabware < BaseStateChanger
- QcableLibraryPlate < BaseStateChanger
- StandardPlate < BaseStateChanger
- StockTube < TubeBaseStateChanger
- TubeBase < BaseStateChanger
StockAssetsController < ApplicationControllerTop Level Namespace
StockLibraryTube < TubeTop Level Namespace
StockMultiplexedLibraryTube < TubeTop Level Namespace
StockStamper < ObjectTop Level Namespace
StockStampersController < ApplicationControllerTop Level Namespace
StripCreationRequest < CustomerRequestTop Level Namespace
StripTube < PlateTop Level Namespace
Studies::AssetGroupsController < ApplicationControllerStudies
Studies::CommentsController < ApplicationControllerStudies
Studies::DocumentsController < ApplicationControllerStudies
Studies::EventsController < ApplicationControllerStudies
Studies::InformationController < ApplicationControllerStudies
Studies::SamplesController < ApplicationControllerStudies
StudiesController < ApplicationControllerTop Level Namespace
StudiesHelperTop Level Namespace
Study < ApplicationRecordTop Level Namespace
- Metadata < ObjectStudy
StudyReport < ApplicationRecordTop Level Namespace
- AssetDetailsStudyReport
- ProcessingError < RuntimeErrorStudyReport
- StudyDetailsStudyReport
- WellDetailsStudyReport
StudyReportJob < StructTop Level Namespace
StudyReportsController < ApplicationControllerTop Level Namespace
StudySample < ApplicationRecordTop Level Namespace
StudyType < ApplicationRecordTop Level Namespace
- AssociationsStudyType
SubclassAttribute < ApplicationRecordTop Level Namespace
Submission < ApplicationRecordTop Level Namespace
- AccessionBehaviourSubmission
- AssetGroupBehaviourSubmission
- AssetSubmissionFinderSubmission
- CrossableSubmission
- DelayedJobBehaviourSubmission
- FlexibleRequestGraphSubmission
  - ChainLinkSubmission::FlexibleRequestGraph
  - Doublet < StructSubmission::FlexibleRequestGraph
  - MultiplexedLink < ObjectSubmission::FlexibleRequestGraph
  - OrderMethodsSubmission::FlexibleRequestGraph
  - RequestChain < ObjectSubmission::FlexibleRequestGraph
  - RequestChainError < RuntimeErrorSubmission::FlexibleRequestGraph
  - UnplexedLink < ObjectSubmission::FlexibleRequestGraph
- LinearRequestGraphSubmission
  - SourceData < StructSubmission::LinearRequestGraph
- PresenterSkeleton < ObjectSubmission
- PrioritiesSubmission
- ProjectValidationSubmission
- RequestOptionsBehaviourSubmission
  - HashWrapper < ObjectSubmission::RequestOptionsBehaviour
- StateMachineSubmission
  - InstanceMethodsSubmission::StateMachine
- SubmissionCreator < PresenterSkeletonSubmission
- SubmissionPresenter < PresenterSkeletonSubmission
SubmissionBuilderJob < StructTop Level Namespace
SubmissionPool < ApplicationRecordTop Level Namespace
- AssociationSubmissionPool
  - PlateSubmissionPool::Association
SubmissionSerializerTop Level Namespace
SubmissionTemplate < ApplicationRecordTop Level Namespace
SubmissionTemplateRequestType < ApplicationRecordTop Level Namespace
SubmissionsController < ApplicationControllerTop Level Namespace
SubmissionsHelperTop Level Namespace
SubmittedAsset < ApplicationRecordTop Level Namespace
Supplier < ApplicationRecordTop Level Namespace
SwipecardableTop Level Namespace
SystemRequest < RequestTop Level Namespace
Tag < ApplicationRecordTop Level Namespace
- AssociationsTag
Tag2Layout < ApplicationRecordTop Level Namespace
- TemplateSubmission < ApplicationRecordTag2Layout
Tag2LayoutTemplate < ApplicationRecordTop Level Namespace
TagGroup < ApplicationRecordTop Level Namespace
- AdapterType < ApplicationRecordTagGroup
- FormObject < ObjectTagGroup
TagGroupsController < ApplicationControllerTop Level Namespace
TagGroupsTask < TaskTop Level Namespace
TagLayout < ApplicationRecordTop Level Namespace
- AsFixedGroupByPlate < WalkerTagLayout
- AsGroupByPlate < WalkerTagLayout
- CombByRowsTagLayout
- CombinatorialSequential < DualIndexWalkerTagLayout
- DualIndexWalker < WalkerTagLayout
- InColumnsTagLayout
- InColumnsThenRowsTagLayout
- InInverseColumnsTagLayout
- InInverseRowsTagLayout
- InRowsTagLayout
- Quadrants < DualIndexWalkerTagLayout
- TemplateSubmission < ApplicationRecordTagLayout
- UnknownDirection < StructTagLayout
- UnknownWalking < StructTagLayout
- WalkManualWellsByPools < WalkerTagLayout
- WalkManualWellsOfPlate < WalkerTagLayout
- WalkWellsByPools < WalkerTagLayout
- WalkWellsOfPlate < WalkerTagLayout
- Walker < ObjectTagLayout
TagLayoutTemplate < ApplicationRecordTop Level Namespace
TagLayoutTemplatesController < ApplicationControllerTop Level Namespace
TagSubstitution < ObjectTop Level Namespace
- Substitution < ObjectTagSubstitution
TagSubstitutionHelperTop Level Namespace
TagSubstitutionsController < ApplicationControllerTop Level Namespace
Task < ApplicationRecordTop Level Namespace
TasksTop Level Namespace
- AddSpikedInControlHandlerTasks
- AssignTagsHandlerTasks
- AssignTagsToTubesHandlerTasks
- AssignTubesToWellsHandlerTasks
- BindingKitBarcodeHandlerTasks
- CherrypickHandlerTasks
- MovieLengthHandlerTasks
- PlatePurposeBehaviorTasks
- PlateTemplateHandlerTasks
- PlateTransferHandlerTasks
  - InvalidBatch < StandardErrorTasks::PlateTransferHandler
- PrepKitBarcodeHandlerTasks
- SamplePrepQcHandlerTasks
- SetCharacterisationDescriptorsHandlerTasks
- SetDescriptorsHandlerTasks
- StartBatchHandlerTasks
- TagGroupHandlerTasks
- ValidateSampleSheetHandlerTasks
TestInformatics < TestCaseTop Level Namespace
Transfer < ApplicationRecordTop Level Namespace
- AssociationsTransfer
- BetweenPlateAndTubes < TransferTransfer
  - WellToTube < ApplicationRecordTransfer::BetweenPlateAndTubes
- BetweenPlates < TransferTransfer
- BetweenPlatesBySubmission < TransferTransfer
- BetweenSpecificTubes < TransferTransfer
- BetweenTubesBySubmission < TransferTransfer
- ControlledDestinationsTransfer
- FromPlateToSpecificTubes < BetweenPlateAndTubesTransfer
- FromPlateToSpecificTubesByPool < BetweenPlateAndTubesTransfer
- FromPlateToTube < TransferTransfer
- FromPlateToTubeByMultiplex < BetweenPlateAndTubesTransfer
- FromPlateToTubeBySubmission < BetweenPlateAndTubesTransfer
- StateTransfer
  - PlateStateTransfer::State
  - TubeStateTransfer::State
- TransfersBySchemaTransfer
- TransfersToKnownDestinationTransfer
TransferRequest < ApplicationRecordTop Level Namespace
TransferRequestCollection < ApplicationRecordTop Level Namespace
- UuidCache < ObjectTransferRequestCollection
TransferRequestCollectionTransferRequest < ApplicationRecordTop Level Namespace
TransferTemplate < ApplicationRecordTop Level Namespace
Tube < LabwareTop Level Namespace
- AttributeUpdaterTube
  - Base < ObjectTube::AttributeUpdater
  - Molarity < BaseTube::AttributeUpdater
  - Volume < BaseTube::AttributeUpdater
- Purpose < PurposeTube
- StandardMx < PurposeTube
- StockMx < PurposeTube
TubeCreation < AssetCreationTop Level Namespace
- ChildTube < ApplicationRecordTubeCreation
TubeFromTubeCreation < AssetCreationTop Level Namespace
TubeRack < LabwareTop Level Namespace
- Purpose < PurposeTubeRack
TubeRackStatus < ApplicationRecordTop Level Namespace
TubeRackStatusesController < ApplicationControllerTop Level Namespace
TubeRackSummariesController < ApplicationControllerTop Level Namespace
UatActionGenerator < NamedBaseTop Level Namespace
UatActions < ObjectTop Level Namespace
- FormField < ObjectUatActions
- GeneratePlateConcentrations < UatActionsUatActions
- GeneratePlates < UatActionsUatActions
- GeneratePrimerPanel < UatActionsUatActions
- GenerateTagGroup < UatActionsUatActions
- GenerateTagLayoutTemplate < UatActionsUatActions
- GenerateTagPlates < UatActionsUatActions
- GenerateTaggedPlates < GeneratePlatesUatActions
- GenerateTubeRacks < UatActionsUatActions
- IntergrationSuiteTools < UatActionsUatActions
- PlateInformation < UatActionsUatActions
- StaticRecordsUatActions
- TestSubmission < UatActionsUatActions
UatActionsController < ApplicationControllerTop Level Namespace
UiHelperTop Level Namespace
- Summary < ObjectUiHelper
- SummaryItem < ObjectUiHelper
UnsuitableAccessionService < AccessionServiceTop Level Namespace
User < ApplicationRecordTop Level Namespace
- AuthenticationUser
  - ClassMethodsUser::Authentication
  - LdapUser::Authentication
  - LocalUser::Authentication
UserQueriesController < ApplicationControllerTop Level Namespace
UserQuery < ObjectTop Level Namespace
UserQueryMailer < BaseTop Level Namespace
UsersController < ApplicationControllerTop Level Namespace
UsersHelperTop Level Namespace
Utf8mb3Validator < EachValidatorTop Level Namespace
Uuid < ApplicationRecordTop Level Namespace
- UuidableUuid
UuidsController < ApplicationControllerTop Level Namespace
ValidateSampleSheetTask < TaskTop Level Namespace
ValidateableTop Level Namespace
- ClassMethodsValidateable
ValidationStateGuardTop Level Namespace
ViewsSchemaTop Level Namespace
VolumeUpdate < ApplicationRecordTop Level Namespace
WarrenTop Level Namespace
- Broadcast < ObjectWarren
  - Channel < ObjectWarren::Broadcast
- BroadcastMessagesWarren
  - ClassMethodsWarren::BroadcastMessages
- Log < ObjectWarren
  - Channel < ObjectWarren::Log
- Message < ObjectWarren
- QueueBroadcastMessage < ObjectWarren
- Test < ObjectWarren
  - Channel < ObjectWarren::Test
Well < ReceptacleTop Level Namespace
- AttributeUpdaterWell
  - Base < ObjectWell::AttributeUpdater
  - Concentration < BaseWell::AttributeUpdater
  - GenderMarkers < BaseWell::AttributeUpdater
  - Rin < BaseWell::AttributeUpdater
  - SnpCount < BaseWell::AttributeUpdater
  - Volume < BaseWell::AttributeUpdater
- Link < ApplicationRecordWell
WellAttribute < ApplicationRecordTop Level Namespace
WorkCompletion < ApplicationRecordTop Level Namespace
- PlateCompletion < ObjectWorkCompletion
- TubeCompletion < ObjectWorkCompletion
WorkCompletionsSubmission < ApplicationRecordTop Level Namespace
WorkOrder < ApplicationRecordTop Level Namespace
- Factory < ObjectWorkOrder
WorkOrderType < ApplicationRecordTop Level Namespace
Workflow < ApplicationRecordTop Level Namespace
WorkflowsController < ApplicationControllerTop Level Namespace
WorkflowsHelperTop Level Namespace
WorkingDilutionPlate < DilutionPlateTop Level Namespace
WorkingSetupTop Level Namespace
- StandardSeeder < ObjectWorkingSetup
XmlLoginProxy < BaseLoginProxyTop Level Namespace