Module: Bioinform::CLI::Helpers

Included in:
PCM2PWM, SplitMotifs
Defined in:
lib/bioinform/cli.rb

Instance Method Summary collapse

Instance Method Details

#basename_changed_extension(filename, extension) ⇒ Object 



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# File 'lib/bioinform/cli.rb', line 18

def basename_changed_extension(filename, extension)
  set_extension(basename_wo_extension(filename), extension)
end

#basename_wo_extension(filename) ⇒ Object 



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# File 'lib/bioinform/cli.rb', line 9

def basename_wo_extension(filename)
  File.basename(filename, File.extname(filename))
end

#change_folder_and_extension(input_filename, extension, folder) ⇒ Object 



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# File 'lib/bioinform/cli.rb', line 21

def change_folder_and_extension(input_filename, extension, folder)
  set_folder(folder, basename_changed_extension(input_filename, extension))
end

#name_wo_extension(filename) ⇒ Object 



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# File 'lib/bioinform/cli.rb', line 6

def name_wo_extension(filename)
  File.join(File.dirname(filename), basename_wo_extension(filename))
end

#set_extension(filename, extension) ⇒ Object 



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# File 'lib/bioinform/cli.rb', line 12

def set_extension(filename, extension)
  "#{filename}.#{extension}"
end

#set_folder(folder, filename) ⇒ Object 



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# File 'lib/bioinform/cli.rb', line 15

def set_folder(folder, filename)
  File.join(folder, filename)
end