Class: Bio::Hinv::HitPubmedId

Inherits:
Object
  • Object
show all
Includes:
Common
Defined in:
lib/bio/io/hinv.rb

Overview

serv = Bio::Hinv::HitPubmedId.new serv.query(“hit” => “HIT000053961”) puts serv.result

Instance Method Summary collapse

Methods included from Common

#query

Constructor Details

#initialize ⇒ HitPubmedId

Returns a new instance of HitPubmedId.



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# File 'lib/bio/io/hinv.rb', line 236

def initialize
  @url = BASE_URI + "hit_pubmedid.php"
end

Instance Method Details

#result ⇒ Object

<?xml version=‘1.0’ encoding=‘UTF-8’?> <H-Inv>

<CDNA_DB-REFERENCE_PUBMED>7624364</CDNA_DB-REFERENCE_PUBMED>
<CDNA_DB-REFERENCE_PUBMED>11279095</CDNA_DB-REFERENCE_PUBMED>
<CDNA_DB-REFERENCE_PUBMED>15489334</CDNA_DB-REFERENCE_PUBMED>

</H-Inv>



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# File 'lib/bio/io/hinv.rb', line 246

def result
  list = []
  @xml.elements.each('//CDNA_DB-REFERENCE_PUBMED') do |e|
    list << e.text.to_i
  end
  return list
end