Class: BELParser::Language::Version1_0::Relationships::Orthologous

Inherits:
Object
  • Object
show all
Extended by:
Relationship
Defined in:
lib/bel_parser/language/version1_0/relationships/orthologous.rb

Overview

Orthologous: A orthologous B - For geneAbundance terms A and B, A orthologousTo B indicates that A and B represent abundances of genes in different species which are sequence similar and which are therefore presumed to share a common ancestral gene. For example, g(HGNC:AKT1) orthologousTo g(MGI:AKT1) indicates that the mouse and human AKT1 genes are orthologous.

Constant Summary collapse

SHORT = 
:orthologous
LONG = 
:orthologous
DESCRIPTION = 
' +A orthologous B+ -  For geneAbundance terms
 and B, +A orthologousTo B+ indicates that A
nd B represent abundances of genes in different
pecies which are sequence similar and which are
herefore presumed to share a common ancestral
ene. For example, +g(HGNC:AKT1) orthologousTo
(MGI:AKT1)+ indicates that the mouse and human
KT1 genes are orthologous.'.freeze

Class Method Summary collapse

Methods included from Relationship

==, causal?, correlative?, decreasing?, deprecated?, description, direct?, directed?, genomic?, increasing?, indirect?, injected?, listable?, long, self?, short, to_h, to_s, to_sym

Class Method Details

.description ⇒ Object 



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# File 'lib/bel_parser/language/version1_0/relationships/orthologous.rb', line 37

def self.description
  DESCRIPTION
end

.genomic? ⇒ Boolean

Returns:

  • (Boolean) 


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# File 'lib/bel_parser/language/version1_0/relationships/orthologous.rb', line 41

def self.genomic?
  true
end

.long ⇒ Object 



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# File 'lib/bel_parser/language/version1_0/relationships/orthologous.rb', line 33

def self.long
  LONG
end

.short ⇒ Object 



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# File 'lib/bel_parser/language/version1_0/relationships/orthologous.rb', line 29

def self.short
  SHORT
end