Class: Bio::Assembly
- Inherits:
-
Object
show all
- Defined in:
- lib/bio-assembly.rb,
lib/bio-assembly/ace.rb,
lib/bio-assembly/caf.rb,
lib/bio-assembly/maf.rb,
lib/bio-assembly/read.rb,
lib/bio-assembly/contig.rb
Defined Under Namespace
Classes: Ace, Caf, Contig, Maf, Read
Constant Summary
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- @@formats =
{ }
Class Method Summary
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Instance Method Summary
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Class Method Details
.open(path, format) ⇒ Object
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# File 'lib/bio-assembly.rb', line 11
def self.open(path, format)
streamer = @@formats[format]
if streamer
streamer.new(path)
else
raise "Format type '#{format}' is not supported"
end
end
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.register_parser(name) ⇒ Object
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# File 'lib/bio-assembly.rb', line 20
def self.register_parser name
@@formats[name] = self
end
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Instance Method Details
#each_contig ⇒ Object
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# File 'lib/bio-assembly.rb', line 24
def each_contig
end
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