Class: Ensembl::Core::Dna

Inherits:

DBConnection

• Object
• ActiveRecord::Base
• DBRegistry::Base
• DBConnection
• Ensembl::Core::Dna

Defined in:

lib/bio-ensembl/core/activerecord.rb

Overview

The Dna class contains the actual DNA sequence for the sequence regions that belong to the seq_level coordinate system.

This class uses ActiveRecord to access data in the Ensembl database. See the general documentation of the Ensembl module for more information on what this means and what methods are available.

Examples:

seq_region = SeqRegion.find(1)
puts seq_region.dna.sequence

Method Summary

Methods inherited from DBConnection

connect, ensemblgenomes_connect

Methods inherited from DBRegistry::Base

generic_connect, get_info, get_name_from_db