Class: Ensembl::Core::RepeatConsensus

Inherits:

DBConnection

• Object
• ActiveRecord::Base
• DBRegistry::Base
• DBConnection
• Ensembl::Core::RepeatConsensus

Defined in:

lib/bio-ensembl/core/activerecord.rb

Overview

The RepeatConsensus class provides an interface to the repeat_consensus table. This table contains consensus sequences for repeats.

This class uses ActiveRecord to access data in the Ensembl database. See the general documentation of the Ensembl module for more information on what this means and what methods are available.

Examples:

repeat = RepeatFeature.find(29)
puts repeat.repeat_consensus.repeat_name + "\t" + repeat.repeat_consensus.repeat_consensus

Method Summary

Methods inherited from DBConnection

connect, ensemblgenomes_connect

Methods inherited from DBRegistry::Base

generic_connect, get_info, get_name_from_db