Class: Bio::KB::Annotation::Illumina::GeneExpression

Inherits:
ActiveRecord::Base
  • Object
show all
Defined in:
lib/bio/annotation/illumina/gene_expression.rb

Class Method Summary collapse

Class Method Details

.annotation=(annotation_name) ⇒ Object

Set the table for further use



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# File 'lib/bio/annotation/illumina/gene_expression.rb', line 25

def self.annotation=(annotation_name)
  if self.list_annotations.include? annotation_name
    self.reset_column_information
    self.table_name=annotation_name
  else
    puts "Annotation named: #{annotation_name} doesn't exist. Please select one from #{self.list_annotations}"
  end
end

.list_annotations ⇒ Object

self.table_name = nil? HumanHT12_V3_0_R1_11283641_A



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# File 'lib/bio/annotation/illumina/gene_expression.rb', line 20

def self.list_annotations
    self.connection.tables.select{|table_name| table_name=~/Human/}
end