Module: PubliSci::Prov

Defined in:
lib/bio-publisci/metadata/prov/dsl.rb,
lib/bio-publisci/metadata/prov/plan.rb,
lib/bio-publisci/metadata/prov/prov.rb,
lib/bio-publisci/metadata/prov/role.rb,
lib/bio-publisci/metadata/prov/agent.rb,
lib/bio-publisci/metadata/prov/usage.rb,
lib/bio-publisci/metadata/prov/entity.rb,
lib/bio-publisci/metadata/prov/element.rb,
lib/bio-publisci/mixins/dereferencable.rb,
lib/bio-publisci/metadata/prov/activity.rb,
lib/bio-publisci/metadata/prov/derivation.rb,
lib/bio-publisci/metadata/prov/association.rb

Defined Under Namespace

Modules: DSL, Dereferencable, Element Classes: Activity, Agent, Association, Derivation, Entity, Plan, Role, Usage

Class Method Summary collapse

Class Method Details

.activities ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 47

def self.activities
  registry[:activities] ||= {}
end

.agents ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 39

def self.agents
  registry[:agents] ||= {}
end

.associations ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 51

def self.associations
  registry[:associations] ||= {}
end

.base_url ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 59

def self.base_url
  @base_url ||= "http://rqtl.org/ns"
end

.base_url=(url) ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 63

def self.base_url=(url)
  @base_url = url
end

.entities ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 43

def self.entities
  registry[:entities] ||= {}
end

.plans ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 55

def self.plans
  registry[:plans] ||= {}
end

.prefixes ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 67

def self.prefixes
  <<-EOF
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix rdf:  <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
  EOF
end

.register(name, object) ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 3

def self.register(name,object)
  # puts "register #{name} #{object} #{associations.size}"
  name = name.to_sym if name
  if object.is_a? Agent
    sub = :agents
  elsif object.is_a? Entity
    sub = :entities
  elsif object.is_a? Activity
    sub = :activities
  elsif object.is_a? Association
    sub = :associations
  elsif object.is_a? Plan
    sub = :plans
  else
    sub = object.class.to_s.split('::').last.downcase.to_sym
    # raise "UnknownElement: unkown object type for #{object}"
  end
  if name
    (registry[sub] ||= {})[name] = object
  else
    (registry[sub] ||= []) << object
  end
end

.registry ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 27

def self.registry
  @registry ||= {}
end

.run(string) ⇒ Object 



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# File 'lib/bio-publisci/metadata/prov/prov.rb', line 31

def self.run(string)
  if File.exists? string
    DSL::Singleton.new.instance_eval(IO.read(string),string)
  else
    DSL::Singleton.new.instance_eval(string)
  end
end