Class: Bio::TwoBit::SarHar1

Inherits:

ReferenceGenome

• Object
• Bio::TwoBit
• ReferenceGenome
• Bio::TwoBit::SarHar1

Defined in:

lib/bio/twobit/references/sarhar1.rb

Constant Summary

Constants inherited from Bio::TwoBit

VERSION

Instance Attribute Summary

Attributes inherited from Bio::TwoBit

#metadata

Instance Method Summary

• #initialize(**kwargs) ⇒ SarHar1 constructor

  A new instance of SarHar1.

Methods inherited from ReferenceGenome

open

Methods inherited from Bio::TwoBit

#bases, #chroms, #clear_cache!, #close, #closed?, #hard_masked_blocks, #info, #masked?, open, #path, #sequence, #soft_masked_blocks

Constructor Details

#initialize(**kwargs) ⇒ SarHar1

Returns a new instance of SarHar1.

# File 'lib/bio/twobit/references/sarhar1.rb', line 6

def initialize(**kwargs)
  @metadata      = Metadata.new
  @metadata.id   = "sarHar1"
  @metadata.name = "sarHar1"
  @metadata.url  = "https://hgdownload.soe.ucsc.edu/downloads.html"
  @data_url      = "https://hgdownload.soe.ucsc.edu/goldenPath/sarHar1/bigZips/sarHar1.2bit"
  super(**kwargs)
end