Module: Bio::UniChem::REST::UniChem_URI

Defined in:
lib/bio-unichem/unichem.rb

Overview

Generate URIs for UniChem REST Web service Bio::UniChem::REST::UniChem_URI

Class Method Summary collapse

Class Method Details

.address(path) ⇒ Object 



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# File 'lib/bio-unichem/unichem.rb', line 25

def self.address(path)
  "#{BASE_URL}/#{path}"
end

.inchikey(inchikey) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/inchikey/AAOVKJBEBIDNHE-UHFFFAOYSA-N



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# File 'lib/bio-unichem/unichem.rb', line 49

def self.inchikey(inchikey)
  address("inchikey/#{inchikey}")
end

.inchikey_all(inchikey) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/inchikey_all/AAOVKJBEBIDNHE-UHFFFAOYSA-N



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# File 'lib/bio-unichem/unichem.rb', line 54

def self.inchikey_all(inchikey)
  address("inchikey_all/#{inchikey}")
end

.mapping(src_id, to_src_id) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/mapping/4/1



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# File 'lib/bio-unichem/unichem.rb', line 44

def self.mapping(src_id, to_src_id)
  address("mapping/#{src_id}/#{to_src_id}")
end

.sources(src_id) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/sources/1



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# File 'lib/bio-unichem/unichem.rb', line 64

def self.sources(src_id)
  address("sources/#{src_id}")
end

.src_compound_id(src_compound_id, src_id, to_src_id = nil) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/src_compound_id/CHEMBL12/1 Example: www.ebi.ac.uk/unichem/rest/src_compound_id/CHEMBL12/1/2



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# File 'lib/bio-unichem/unichem.rb', line 31

def self.src_compound_id(src_compound_id, src_id, to_src_id = nil)
  path = [src_compound_id, src_id, to_src_id].compact.join("/")
  address("src_compound_id/#{path}")
end

.src_compound_id_all(src_compound_id, src_id, to_src_id = nil) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/src_compound_id_all/CHEMBL12/1 Example: www.ebi.ac.uk/unichem/rest/src_compound_id_all/CHEMBL12/1/2



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# File 'lib/bio-unichem/unichem.rb', line 38

def self.src_compound_id_all(src_compound_id, src_id, to_src_id = nil)
  path = [src_compound_id, src_id, to_src_id].compact.join("/")
  address("src_compound_id_all/#{path}")
end

.src_compound_id_all_obsolete(src_compound_id, src_id, to_src_id = nil) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/src_compound_id_all_obsolete/DB07699/2 Example: www.ebi.ac.uk/unichem/rest/src_compound_id_all_obsolete/DB07699/2/1



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# File 'lib/bio-unichem/unichem.rb', line 85

def self.src_compound_id_all_obsolete(src_compound_id, src_id, to_src_id = nil)
  path = [src_compound_id, src_id, to_src_id].compact.join("/")
  address("src_compound_id_all_obsolete/#{path}")
end

.src_compound_id_url(src_compound_id, src_id, to_src_id) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/src_compound_id_url/CHEMBL12/1/2



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# File 'lib/bio-unichem/unichem.rb', line 79

def self.src_compound_id_url(src_compound_id, src_id, to_src_id)
  address("src_compound_id_url/#{src_compound_id}/#{src_id}/#{to_src_id}")
end

.src_ids ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/src_ids/



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# File 'lib/bio-unichem/unichem.rb', line 59

def self.src_ids
  address("src_ids/")
end

.structure(src_compound_id, src_id) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/structure/CHEMBL12/1



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# File 'lib/bio-unichem/unichem.rb', line 69

def self.structure(src_compound_id, src_id)
  address("structure/#{src_compound_id}/#{src_id}")
end

.structure_all(src_compound_id, src_id) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/structure_all/CHEMBL12/1



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# File 'lib/bio-unichem/unichem.rb', line 74

def self.structure_all(src_compound_id, src_id)
  address("structure_all/#{src_compound_id}/#{src_id}")
end

.verbose_inchikey(inchikey) ⇒ Object

Example: www.ebi.ac.uk/unichem/rest/verbose_inchikey/HAUGRYOERYOXHX-UHFFFAOYSA-N



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# File 'lib/bio-unichem/unichem.rb', line 91

def self.verbose_inchikey(inchikey)
  address("verbose_inchikey/#{inchikey}")
end