Class: Bio::Hinv::HitXML

Inherits:

Object

• Object
• Bio::Hinv::HitXML

Includes:

Common

Defined in:

lib/bio/io/hinv.rb

Overview

serv = Bio::Hinv::HitXML.new serv.query(“hit” => “HIT000000001”) puts serv.result

Instance Method Summary

• #initialize ⇒ HitXML constructor

  A new instance of HitXML.

• #result ⇒ Object

  <?xml version=“1.0” standalone=“yes” ?> <H-Inv> <cDNAXML> <CLUSTER-ID>HIX0021591</CLUSTER-ID> <CLUSTER-ID-VERSION>HIX0021591.11</CLUSTER-ID-VERSION> <H-INVITATIONAL-ID>HIT000000001</H-INVITATIONAL-ID> : </PROBE-MAPPING> </EXPRESSION> </cDNAXML> </H-Inv>.

Methods included from Common

#query

Constructor Details

#initialize ⇒ HitXML

Returns a new instance of HitXML.

# File 'lib/bio/io/hinv.rb', line 261

def initialize
  @url = BASE_URI + "hit_xml.php"
end

Instance Method Details

#result ⇒ Object

<?xml version=“1.0” standalone=“yes” ?> <H-Inv>

<cDNAXML>
<CLUSTER-ID>HIX0021591</CLUSTER-ID>
<CLUSTER-ID-VERSION>HIX0021591.11</CLUSTER-ID-VERSION>
<H-INVITATIONAL-ID>HIT000000001</H-INVITATIONAL-ID>
  :
  </PROBE-MAPPING>
 </EXPRESSION>
</cDNAXML>

</H-Inv>

# File 'lib/bio/io/hinv.rb', line 276

def result
  @result
end