Class: Bio::PDB::Heterogen

Inherits:

Residue

• Object
• Residue
• Bio::PDB::Heterogen

Includes:

HetatmFinder

Defined in:

lib/bio/db/pdb/residue.rb

Overview

Bio::PDB::Heterogen is a class to store a heterogen. It inherits Bio::PDB::Residue and most of the methods are the same.

The object would contain some HETATMs (Bio::PDB::Record::HETATM objects).

Constant Summary

Constants included from Utils

Utils::ElementMass

Instance Attribute Summary

Attributes inherited from Residue

#atoms, #chain, #iCode, #resName, #resSeq, #residue_id

Instance Method Summary

• #hetatm ⇒ Object

  Always returns true.

Methods included from HetatmFinder

#find_hetatm

Methods inherited from Residue

#<=>, #[], #addAtom, #each, get_residue_id_from_atom, #initialize, #inspect, #to_s

Methods included from AtomFinder

#atoms, #each_atom, #find_atom

Methods included from Utils

acos, calculatePlane, #centreOfGravity, convert_to_xyz, dihedral_angle, distance, #finder, #geometricCentre, rad2deg, to_xyz

Constructor Details

This class inherits a constructor from Bio::PDB::Residue

Instance Method Details

#hetatm ⇒ Object

Always returns true.

If the residue is HETATM, returns true. Otherwise, returns false.

# File 'lib/bio/db/pdb/residue.rb', line 160

def hetatm
  true
end