Documentation for cagnut_gatk (0.3.2)

Alphabetic Index

File Listing

README

Namespace Listing A-Z

A

AnalyzeCovariates (CagnutGatk)

B

Base (CagnutGatk)
BaseRecalibrator (CagnutGatk)

C

CagnutGatk
CheckTools (CagnutGatk)
Configuration (CagnutGatk)
CountRead (CagnutGatk)

D

DepthOfCoverage (CagnutGatk)

H

HaplotypeCaller (CagnutGatk)

I

IndelRealigner (CagnutGatk)

P

PrintReads (CagnutGatk)

R

RealignerTargetCreator (CagnutGatk)

U

UnifiedGenotyper (CagnutGatk)
Util (CagnutGatk)

V

VariantEval (CagnutGatk)
VariantFiltration (CagnutGatk)