Module: Cagnut::Cli::NewProject::Draw

Defined in:
lib/cagnut_pipeline_draw/cli/new_project/draw.rb

Instance Method Summary collapse

Instance Method Details

#actgun_pipeline_draw_root ⇒ Object 



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# File 'lib/cagnut_pipeline_draw/cli/new_project/draw.rb', line 6

def actgun_pipeline_draw_root
  CagnutPipelineDraw.root.join('templates')
end

#copy_draw_tools_config(folder) ⇒ Object 



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# File 'lib/cagnut_pipeline_draw/cli/new_project/draw.rb', line 10

def copy_draw_tools_config folder
  draw_tools_yml = File.join(actgun_pipeline_draw_root, 'draw_tools.yml')
  copy_file "#{draw_tools_yml}", "#{folder}/draw_tools.yml"
end

#draw_pipeline_dependency_gems ⇒ Object 



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# File 'lib/cagnut_pipeline_draw/cli/new_project/draw.rb', line 15

def draw_pipeline_dependency_gems
  %W(
    'cagnut_core'
    'cagnut_bwa'
    'cagnut_gatk'
    'cagnut_samtools'
    'cagnut_picard'
    'cagnut_snpeff'
    'cagnut_toolbox'
  )
end