Module: DaVinciUSDrugFormularyTestKit::MustSupportTest
Constant Summary
FHIRResourceNavigation::DAR_EXTENSION_URL
Instance Method Summary
collapse
#find_a_value_at, #find_slice_via_discriminator, #get_next_value, #resolve_path, #verify_slice_by_values
Instance Method Details
#all_scratch_resources ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 10
def all_scratch_resources
scratch_resources[:all]
end
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#exclude_uscdi_only_test? ⇒ Boolean
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 80
def exclude_uscdi_only_test?
config.options[:exclude_uscdi_only_test] == true
end
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#find_slice(resource, path, discriminator) ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 152
def find_slice(resource, path, discriminator)
find_a_value_at(resource, path) do |element|
case discriminator[:type]
when 'patternCodeableConcept'
coding_path = discriminator[:path].present? ? "#{discriminator[:path]}.coding" : 'coding'
find_a_value_at(element, coding_path) do |coding|
coding.code == discriminator[:code] && coding.system == discriminator[:system]
end
when 'patternCoding'
coding_path = discriminator[:path].present? ? discriminator[:path] : ''
find_a_value_at(element, coding_path) do |coding|
coding.code == discriminator[:code] && coding.system == discriminator[:system]
end
when 'patternIdentifier'
find_a_value_at(element, discriminator[:path]) { |identifier| identifier.system == discriminator[:system] }
when 'value'
values = discriminator[:values].map { |value| value.merge(path: value[:path].split('.')) }
find_slice_by_values(element, values)
when 'type'
case discriminator[:code]
when 'Date'
begin
Date.parse(element)
rescue ArgumentError
false
end
when 'DateTime'
begin
DateTime.parse(element)
rescue ArgumentError
false
end
when 'String'
element.is_a? String
else
element.is_a? FHIR.const_get(discriminator[:code])
end
when 'requiredBinding'
coding_path = discriminator[:path].present? ? "#{discriminator[:path]}.coding" : 'coding'
find_a_value_at(element, coding_path) { |coding| discriminator[:values].include?(coding.code) }
end
end
end
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#find_slice_by_values(element, value_definitions) ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 196
def find_slice_by_values(element, value_definitions)
path_prefixes = value_definitions.map { |value_definition| value_definition[:path].first }.uniq
Array.wrap(element).find do |el|
path_prefixes.all? do |path_prefix|
value_definitions_for_path =
value_definitions
.select { |value_definition| value_definition[:path].first == path_prefix }
.each { |value_definition| value_definition[:path].shift }
find_a_value_at(el, path_prefix) do |el_found|
child_element_value_definitions, current_element_value_definitions =
value_definitions_for_path.partition { |value_definition| value_definition[:path].present? }
current_element_values_match =
current_element_value_definitions
.all? { |value_definition| value_definition[:value] == el_found }
child_element_values_match =
if child_element_value_definitions.present?
find_slice_by_values(el_found, child_element_value_definitions)
else
true
end
current_element_values_match && child_element_values_match
end
end
end
end
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#handle_must_support_choices ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 36
def handle_must_support_choices
missing_elements.delete_if do |element|
choices = metadata.must_supports[:choices].find { |choice| choice[:paths]&.include?(element[:path]) }
is_any_choice_supported?(choices)
end
missing_extensions.delete_if do |extension|
choices = metadata.must_supports[:choices].find { |choice| choice[:extension_ids]&.include?(extension[:id]) }
is_any_choice_supported?(choices)
end
missing_slices.delete_if do |slice|
choices = metadata.must_supports[:choices].find { |choice| choice[:slice_names]&.include?(slice[:slice_id]) }
is_any_choice_supported?(choices)
end
end
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#is_any_choice_supported?(choices) ⇒ Boolean
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 53
def is_any_choice_supported?(choices)
choices.present? &&
(
choices[:paths]&.any? { |path| missing_elements.none? { |element| element[:path] == path } } ||
choices[:extension_ids]&.any? do |extension_id|
missing_extensions.none? do |extension|
extension[:id] == extension_id
end
end ||
choices[:slice_names]&.any? { |slice_name| missing_slices.none? { |slice| slice[:slice_id] == slice_name } }
)
end
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#missing_element_string(element_definition) ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 72
def missing_element_string(element_definition)
if element_definition[:fixed_value].present?
"#{element_definition[:path]}:#{element_definition[:fixed_value]}"
else
element_definition[:path]
end
end
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#missing_elements(resources = []) ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 115
def missing_elements(resources = [])
@missing_elements ||=
must_support_elements.select do |element_definition|
resources.none? do |resource|
path = element_definition[:path] value_found = find_a_value_at(resource, path) do |value|
value_without_extensions =
value.respond_to?(:to_hash) ? value.to_hash.except('extension') : value
(value_without_extensions.present? || value_without_extensions == false) &&
(element_definition[:fixed_value].blank? || value == element_definition[:fixed_value])
end
value_found.present? || value_found == false
end
end
@missing_elements
end
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#missing_extensions(resources = []) ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 92
def missing_extensions(resources = [])
@missing_extensions ||=
must_support_extensions.select do |extension_definition|
resources.none? do |resource|
path = extension_definition[:path]
if extension_definition[:path] == 'extension'
resource.extension.any? { |extension| extension.url == extension_definition[:url] }
else
extension = find_a_value_at(resource, path)
extension&.url == extension_definition[:url]
end
end
end
end
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#missing_must_support_strings ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 66
def missing_must_support_strings
missing_elements.map { |element_definition| missing_element_string(element_definition) } +
missing_slices.map { |slice_definition| slice_definition[:slice_id] } +
missing_extensions.map { |extension_definition| extension_definition[:id] }
end
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#missing_slices(resources = []) ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 142
def missing_slices(resources = [])
@missing_slices ||=
must_support_slices.select do |slice|
resources.none? do |resource|
path = slice[:path] find_slice(resource, path, slice[:discriminator]).present?
end
end
end
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#must_support_elements ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 107
def must_support_elements
if exclude_uscdi_only_test?
metadata.must_supports[:elements].reject { |element| element[:uscdi_only] }
else
metadata.must_supports[:elements]
end
end
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#must_support_extensions ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 84
def must_support_extensions
if exclude_uscdi_only_test?
metadata.must_supports[:extensions].reject { |extension| extension[:uscdi_only] }
else
metadata.must_supports[:extensions]
end
end
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#must_support_slices ⇒ Object
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 134
def must_support_slices
if exclude_uscdi_only_test?
metadata.must_supports[:slices].reject { |slice| slice[:uscdi_only] }
else
metadata.must_supports[:slices]
end
end
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# File 'lib/davinci_us_drug_formulary_test_kit/must_support_test.rb', line 14
def perform_must_support_test(resources)
skip_if resources.blank?, "No #{resource_type} resources were found"
missing_elements(resources)
missing_slices(resources)
missing_extensions(resources)
handle_must_support_choices if metadata.must_supports[:choices].present?
if resource_type == 'MedicationKnowledge'
missing_elements.delete_if { |element| element[:path].include?('coding:') }
pass if (missing_elements + missing_extensions).empty?
else
missing_slices(resources)
pass if (missing_elements + missing_slices + missing_extensions).empty?
end
skip "Could not find #{missing_must_support_strings.join(', ')} in the #{resources.length} " \
"provided #{resource_type} resource(s)"
end
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