Class: Fastq

Inherits:
Record show all
Defined in:
lib/dna/parsers/fastq.rb

Overview

Fastq record

Instance Attribute Summary collapse

Instance Method Summary collapse

Methods inherited from Record

#length

Constructor Details

#initialize(args = {}) ⇒ Fastq

Returns a new instance of Fastq.



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# File 'lib/dna/parsers/fastq.rb', line 34

def initialize(args={})
  @name = args[:name]
  @sequence = args[:sequence]
  @quality = args[:quality]
end

Instance Attribute Details

#format ⇒ Object

Returns the value of attribute format.



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# File 'lib/dna/parsers/fastq.rb', line 32

def format
  @format
end

#name ⇒ Object

Returns the value of attribute name.



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# File 'lib/dna/parsers/fastq.rb', line 32

def name
  @name
end

#quality ⇒ Object

Returns the value of attribute quality.



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# File 'lib/dna/parsers/fastq.rb', line 32

def quality
  @quality
end

#sequence ⇒ Object

Returns the value of attribute sequence.



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# File 'lib/dna/parsers/fastq.rb', line 32

def sequence
  @sequence
end

Instance Method Details

#to_s ⇒ Object 



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# File 'lib/dna/parsers/fastq.rb', line 40

def to_s
  "@#{@name}\n#{@sequence}\n+#{@name}\n#{@quality}"
end