Class: Ensembl::Variation::Population

Inherits:

ModelBase

• Object
• ActiveRecord::Base
• Connection
• ModelBase
• Ensembl::Variation::Population

Extended by:

SearchByName

Defined in:

lib/ensembl/variation/activerecord.rb

Instance Method Summary

• #all_individual_populations ⇒ Object
• #all_individuals ⇒ Object
• #all_population_genotypes ⇒ Object
• #parent ⇒ Object

Methods included from SearchByName

search

Methods included from PrimaryKeyOverrides

#primary_key

Methods included from TableNameOverrides

#table_name

Instance Method Details

#all_individual_populations ⇒ Object

# File 'lib/ensembl/variation/activerecord.rb', line 204

def all_individual_populations
  IndividualPopulation.where(population_id: sub_population_ids(self)<<id)
end

#all_individuals ⇒ Object

# File 'lib/ensembl/variation/activerecord.rb', line 208

def all_individuals
  Individual.where individual_id: all_individual_populations.pluck(:individual_id)
end

#all_population_genotypes ⇒ Object

# File 'lib/ensembl/variation/activerecord.rb', line 212

def all_population_genotypes
  PopulationGenotype.where(population_id: sub_population_ids(self)<<id)
end

#parent ⇒ Object

# File 'lib/ensembl/variation/activerecord.rb', line 199

def parent
  ps=PopulationStructure.find_by(sub_population: id)
  ps.super_population unless ps.nil?
end