Exception: GeneValidatorApp::BLAST_NOT_COMPATIBLE

Inherits:
StandardError
  • Object
show all
Defined in:
lib/genevalidatorapp/exceptions.rb

Overview

Raised if SequenceServer determined NCBI BLAST+ present on the user’s system but not meeting SequenceServer’s minimum version requirement.

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(version) ⇒ BLAST_NOT_COMPATIBLE

Returns a new instance of BLAST_NOT_COMPATIBLE.



105
106
107
 
# File 'lib/genevalidatorapp/exceptions.rb', line 105

def initialize(version)
  @version  = version
end

Instance Attribute Details

#version ⇒ Object (readonly)

Returns the value of attribute version.



109
110
111
 
# File 'lib/genevalidatorapp/exceptions.rb', line 109

def version
  @version
end

Instance Method Details

#to_s ⇒ Object 



111
112
113
114
115
116
 
# File 'lib/genevalidatorapp/exceptions.rb', line 111

def to_s
  "Your BLAST+ version \#{version} is outdated.\nSequenceServer needs NCBI BLAST+ version \#{MINIMUM_BLAST_VERSION} or higher.\n"
end