Class: IntervalList::BasicInterval

Inherits:
Object
  • Object
show all
Includes:
Interval
Defined in:
lib/intervals.rb

Instance Attribute Summary collapse

Instance Method Summary collapse

Methods included from Interval

#above?, #below?, #center, #clone, #contains?, #dist, #intersect, #intersection_size, #nearest, #overlap, #overlaps?, #size, #strict_diff, #strict_overlap, #strict_union

Constructor Details

#initialize(opts) ⇒ BasicInterval

Returns a new instance of BasicInterval.



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# File 'lib/intervals.rb', line 221

def initialize opts
  @chrom = opts[:chrom]
  @start = opts[:start]
  @stop = opts[:stop]
  @stop = @start = opts[:pos] if opts[:pos]
  @data = opts[:data]
end

Instance Attribute Details

#chrom ⇒ Object

Returns the value of attribute chrom.



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# File 'lib/intervals.rb', line 219

def chrom
  @chrom
end

#data ⇒ Object

Returns the value of attribute data.



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# File 'lib/intervals.rb', line 219

def data
  @data
end

#start ⇒ Object

Returns the value of attribute start.



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# File 'lib/intervals.rb', line 219

def start
  @start
end

#stop ⇒ Object

Returns the value of attribute stop.



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# File 'lib/intervals.rb', line 219

def stop
  @stop
end

Instance Method Details

#copy ⇒ Object 



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# File 'lib/intervals.rb', line 228

def copy
  self.class.new :chrom => @chrom, :start => @start, :stop => @stop, :data => @data
end

#inspect ⇒ Object 



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# File 'lib/intervals.rb', line 231

def inspect
  "#<#{self.class}:0x#{'%x' % (object_id << 1)} @chrom=#{@chrom} @start=#{@start} @stop=#{@stop}>"
end