Module: ODDB::OdbaExporter

Defined in:
ext/export/src/oddbdat.rb,
ext/export/src/patent_xls.rb,
ext/export/src/csv_exporter.rb,
ext/export/src/generics_xls.rb,
ext/export/src/odba_exporter.rb,
ext/export/src/competition_xls.rb,
ext/export/test/test_generics_xls.rb

Defined Under Namespace

Modules: CsvExporter Classes: AcLimLine, AcLimTable, AcLine, AcOddbLine, AcOddbTable, AcTable, AccompLine, AccompTable, AcmedLine, AcmedTable, AcnamLine, AcnamTable, AcpricealgExfactoryLine, AcpricealgPublicLine, AcpricealgTable, AcscLine, AcscTable, AtcLine, CodesTable, CompLine, CompTable, CompetitionXls, EanLine, EanTable, GalenicFormLine, GenericXls, LimTxtLine, LimTxtTable, LimitationLine, LimitationTable, Line, MCMLine, MCMTable, PackageLine, PatentXls, Readme, ScLine, ScTable, SubstanceLine, Table, TestGenericXls

Class Method Summary collapse

Class Method Details

.clear ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 21

def OdbaExporter.clear
begin
	Thread.new { 
		sleep 1
		DRb.thread.exit
	}
end
	nil
end

.compress(dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 30

def OdbaExporter.compress(dir, name)
	FileUtils.mkdir_p(dir)
	Dir.chdir(dir)
	tmp_name = name + '.tmp'
	gz_name = tmp_name + '.gz'
	zip_name = tmp_name + '.zip'
	gzwriter = 	Zlib::GzipWriter.open(gz_name)
	zipwriter = Zip::ZipOutputStream.open(zip_name)
	zipwriter.put_next_entry(name)
	File.open(name, "r") { |fh|
		fh.each { |line|
			gzwriter << line
			zipwriter.puts(line)
		}
	}
	gzwriter.close if(gzwriter)
	zipwriter.close if(zipwriter)
	FileUtils.mv(gz_name, name + '.gz')
	FileUtils.mv(zip_name, name + '.zip')
	name
end

.compress_many(dir, name, files) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 51

def OdbaExporter.compress_many(dir, name, files)
	FileUtils.mkdir_p(dir)
	Dir.chdir(dir)
	tmp_name = name + '.tmp'
	tar_name = tmp_name + '.tar'
	gz_name = tar_name + '.gz'
	File.delete(gz_name) if(File.exist?(gz_name))
	tar_archive = Archive::Tar.new(tar_name)
	tar_archive.create_archive(files.join(" "))
	tar_archive.compress_archive
	FileUtils.mv(gz_name, name + '.tar.gz')

	zip_name = tmp_name + '.zip'
	File.delete(zip_name) if(File.exist?(zip_name))
	Zip::ZipOutputStream.open(zip_name) { |zos|
		files.each { |fname|
			zos.put_next_entry(fname)
			zos.puts File.read(fname)
		}
	}
	FileUtils.mv(zip_name, name + '.zip')
	name
end

.export_analysis_csv(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 103

def OdbaExporter.export_analysis_csv(odba_ids, dir, name)
	safe_export(dir, name) { |fh|
		fh << <<-HEAD
groupcd;poscd;anonymouspos;analysis_description_de;analysis_description_fr;analysis_footnote_de;analysis_footnote_fr;analysis_taxnote_de;analysis_taxnote_fr;analysis_limitation_de;analysis_limitation_fr;analysis_list_title_de;analysis_list_title_fr;lab_areas;taxpoints;finding;analysis_permissions_de;analysis_permissions_fr
		HEAD
		odba_ids.each { |odba_id|
			item = ODBA.cache.fetch(odba_id, nil)
			CsvExporter.dump(CsvExporter::ANALYSIS, item, fh)	
		}
		nil
	}
end

.export_competition_xls(comp_id, dir, name, db_path = nil) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 74

def OdbaExporter.export_competition_xls(comp_id, dir, name, db_path=nil)
	safe_export(dir, name) { |fh|
		exporter = CompetitionXls.new(fh.path, db_path)
		company = ODBA.cache.fetch(comp_id)
		exporter.export_competition(company)
		exporter.close
		nil
	}
end

.export_doc_csv(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 83

def OdbaExporter.export_doc_csv(odba_ids, dir, name)
	safe_export(dir, name) { |fh|
		fh << <<-HEAD
ean13;exam;salutation;title;firstname;name;praxis;addresstype;address_name;lines;address;plz;city;canton;fon;fax;email;language;specialities
		HEAD
		odba_ids.each { |odba_id|
			item = ODBA.cache.fetch(odba_id, nil)
			CsvExporter.dump(CsvExporter::DOCTOR, item, fh)
		}
		nil
	}
end

.export_ean13_idx_th_csv(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 115

def OdbaExporter.export_ean13_idx_th_csv(odba_ids, dir, name)
  safe_export(dir, name) { |fh|
    fh << <<-HEAD
ean13;index_therapeuticus
    HEAD
    odba_ids.each { |odba_id|
      item = ODBA.cache.fetch(odba_id, nil)
      CsvExporter.dump([ :barcode, :index_therapeuticus ], item, fh)	
    }
    nil
  }
end

.export_generics_xls(dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 95

def OdbaExporter.export_generics_xls(dir, name)
	safe_export(dir, name) { |fh|
		exporter = GenericXls.new(fh.path)
		exporter.export_generics
		exporter.close
		nil
	}
end

.export_idx_th_csv(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 127

def OdbaExporter.export_idx_th_csv(odba_ids, dir, name)
  safe_export(dir, name) { |fh|
    fh << <<-HEAD
index_therapeuticus;description_de;description_fr;comment_de;comment_fr;limitation_de;limitation_fr
    HEAD
    odba_ids.each { |odba_id|
      item = ODBA.cache.fetch(odba_id, nil)
      CsvExporter.dump(CsvExporter::INDEX_THERAPEUTICUS, item, fh)	
    }
    nil
  }
end

.export_migel_csv(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 139

def OdbaExporter.export_migel_csv(odba_ids, dir, name)
	safe_export(dir, name) { |fh|
		fh << <<-HEAD
migel_code;group_code;group_de;group_fr;group_it;group_limitation_de;group_limitation_fr;group_limitation_it;subgroup_code;subgroup_de;subgroup_fr;subgroup_it;subgroup_limitation_de;subgroup_limitation_fr;subgroup_limitation_it;product_code;product_de;product_fr;product_it;accessory_code;accessory_de;accessory_fr;accessory_it;product_limitation_de;product_limitation_fr;product_limitation_it;price;qty;unit_de;unit_fr;unit_it;limitation_flag;date
		HEAD
		odba_ids.each { |odba_id|
			item = ODBA.cache.fetch(odba_id, nil)
			CsvExporter.dump(CsvExporter::MIGEL, item, fh)
		}
		true
	}
end

.export_narcotics_csv(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 151

def OdbaExporter.export_narcotics_csv(odba_ids, dir, name)
	safe_export(dir, name) { |fh|
		odba_ids.each { |odba_id|
			item = ODBA.cache.fetch(odba_id, nil)
			CsvExporter.dump(CsvExporter::NARCOTIC, item, fh)
		}
		nil
	}
end

.export_oddbdat(odba_ids, dir, klasses) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 160

def OdbaExporter.export_oddbdat(odba_ids, dir, klasses)
	FileUtils.mkdir_p(dir)
	files = klasses.collect { |klass| 
		table = klass.new
		file = Tempfile.new(table.filename, dir)
		[file, table]
	}
	if(odba_ids.nil?)
		files.each { |file, table|
			file.puts table.lines
		}
	else
		odba_ids.each { |odba_id|
			item = ODBA.cache.fetch(odba_id, nil)
			files.each { |file, table|
				file.puts table.lines(item)
			}
			#ODBA.cache.clear
		}
	end
	files.each { |file, table|
		path = File.join(dir, table.filename)
		FileUtils.mv(file.path, path)
	}
	files.collect { |file, table| table.filename }
ensure
	if(files)
		files.each { |file, table| file.close! }
	end
end

.export_patent_xls(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 190

def OdbaExporter.export_patent_xls(odba_ids, dir, name)
  nil_data = []
  safe_export(dir, name) { |fh|
    exporter = PatentXls.new(fh.path)
    exporter.export(odba_ids, nil_data)
    exporter.close
    nil
  }
  nil_data
end

.export_price_history_csv(odba_ids, dir, name) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 200

def OdbaExporter.export_price_history_csv(odba_ids, dir, name)
  epoch = Date.new 1979
  safe_export(dir, name) { |fh|
    dates = {}
    packages = odba_ids.collect do |odba_id|
      pack = ODBA.cache.fetch(odba_id, nil)
      pack.prices.each do |type, prices|
        prices.each do |price|
          dates[(time = price.valid_from) ? time.to_date : epoch] = true
        end
      end
      pack
    end
    dates = dates.keys.sort
    if dates.first == epoch
      dates[0] = nil
    end
    head = %w{iksnr ikscd name size barcode pharmacode out_of_trade}
    dates.each do |date|
      datestr = date ? date.strftime('%d.%m.%Y') : 'unknown'
      head.push "#{datestr} (exfactory)", 'authority', 'origin',
                "#{datestr} (public)", 'authority', 'origin'
    end
    CSV::Writer.generate(fh, ';') do |csv| csv << head end
    packages.sort_by do |pack| pack.name end.each do |pack|
      CsvExporter.dump(CsvExporter::PRICE_HISTORY, pack, fh, :dates => dates)
    end
    nil
  }
end

.export_yaml(odba_ids, dir, name, opts = {}) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 230

def OdbaExporter.export_yaml(odba_ids, dir, name, opts={})
    opts.each do |key, val| Thread.current[key] = val end
	safe_export(dir, name) { |fh|
		odba_ids.each { |odba_id|
			YAML.dump(ODBA.cache.fetch(odba_id, nil), fh)
			fh.puts
		}
		nil
	}
end

.remote_safe_export(dir, name, &block) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 240

def OdbaExporter.remote_safe_export(dir, name, &block)
  FileUtils.mkdir_p(dir)
  Tempfile.open(name, dir) { |fh|
    fh.close
    block.call(fh.path)
    newpath = File.join(dir, name)
    FileUtils.mv(fh.path, newpath)
    FileUtils.chmod(0644, newpath)
    compress(dir, name)
  }
  name
end

.safe_export(dir, name, &block) ⇒ Object 



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# File 'ext/export/src/odba_exporter.rb', line 252

def OdbaExporter.safe_export(dir, name, &block)
	FileUtils.mkdir_p(dir)
	Tempfile.open(name, dir) { |fh|
		block.call(fh)
		fh.close
		newpath = File.join(dir, name)
		FileUtils.mv(fh.path, newpath)
		FileUtils.chmod(0644, newpath)
		compress(dir, name)
	}
	name
end