Module: Inferno::Terminology::Tasks::DownloadUMLSNotice

Included in:
ProcessUMLS, ProcessUMLSTranslations
Defined in:
lib/inferno/terminology/tasks/download_umls_notice.rb

Instance Method Summary collapse

Instance Method Details

#download_umls_notice ⇒ Object 



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# File 'lib/inferno/terminology/tasks/download_umls_notice.rb', line 5

def download_umls_notice
  Inferno.logger.info <<~NOTICE
    UMLS file not found. Download the US National Library of Medicine (NLM) Unified
    Medical Language System (UMLS) Full Release files:
    https://www.nlm.nih.gov/research/umls/licensedcontent/umlsknowledgesources.html

    Install the metathesaurus with the following data sources:
    CVX|CVX;ICD10CM|ICD10CM;ICD10PCS|ICD10PCS;ICD9CM|ICD9CM;LNC|LNC;MTHICD9|ICD9CM;RXNORM|RXNORM;SNOMEDCT_US|SNOMEDCT;CPT;HCPCS
    After installation, copy `{install path}/META/MRCONSO.RRF` into your
    `./tmp/terminology` folder, and rerun this task.
  NOTICE
end