Module: LabwareCreators::RequireWellsWithConcentrations
- Extended by:
- ActiveSupport::Concern
- Included in:
- ConcentrationNormalisedPlate, PartialStampedPlate
- Defined in:
- app/models/concerns/labware_creators/require_wells_with_concentrations.rb
Overview
Can be included in plate creators which require well aliquots to have concentrations
Constant Summary collapse
- PLATE_INCLUDES =
'wells.aliquots,wells.qc_results,wells.requests_as_source.request_type,wells.aliquots.request.request_type'
Instance Method Summary collapse
-
#dilutions_config ⇒ Object
The configuration from the plate purpose.
- #parent ⇒ Object
-
#wells_with_aliquots_must_have_concentrations ⇒ Object
Validation method that can be called to check that all wells with aliquots have an associated qc_result concentration value.
Instance Method Details
#dilutions_config ⇒ Object
The configuration from the plate purpose.
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# File 'app/models/concerns/labware_creators/require_wells_with_concentrations.rb', line 15 def dilutions_config purpose_config.fetch(:dilutions) end |
#parent ⇒ Object
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# File 'app/models/concerns/labware_creators/require_wells_with_concentrations.rb', line 10 def parent @parent ||= Sequencescape::Api::V2.plate_with_custom_includes(PLATE_INCLUDES, uuid: parent_uuid) end |
#wells_with_aliquots_must_have_concentrations ⇒ Object
Validation method that can be called to check that all wells with aliquots have an associated qc_result concentration value.
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# File 'app/models/concerns/labware_creators/require_wells_with_concentrations.rb', line 21 def wells_with_aliquots_must_have_concentrations concs_missing = wells_with_missing_concs return if concs_missing.empty? msg = 'wells missing a concentration (have you uploaded concentrations via QuantHub?):' errors.add(:parent, "#{msg} #{concs_missing.join(', ')}") end |