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#calculate_read_length Top Level Namespace
#coverage MiseqRunStats::ResequencingSampleStats
#delete_file_with_dependencies Top Level Namespace
#extract_file_prefixes_and_sample_name Top Level Namespace
#fastq_stats MiseqRunStats::ResequencingSampleStats
#fastq_stats MiseqRunStats::AssemblySampleStats
#file_exists? Top Level Namespace
#find_executable Top Level Namespace
#first_quartile FastqAssessment::ReadPositionStats
#generate_quality_metrics Top Level Namespace
#generate_quality_stats_for_read FastqAssessment
#mean Enumerable
#mean_contig_size MiseqRunStats::AssemblySampleStats
#mean_quality FastqAssessment::FastqStats
#mean_quality FastqAssessment::ReadPositionStats
#median_quality FastqAssessment::ReadPositionStats
#n50 MiseqRunStats::AssemblySampleStats
#number_of_bases MiseqRunStats::ResequencingRunStats
#number_of_bases MiseqRunStats::AssemblySampleStats
#number_of_bases MiseqRunStats::AssemblyRunStats
#number_of_clusters MiseqRunStats::ResequencingRunStats
#number_of_clusters MiseqRunStats::ResequencingSampleStats
#number_of_clusters MiseqRunStats::AssemblySampleStats
#number_of_clusters MiseqRunStats::AssemblyRunStats
#number_of_contigs MiseqRunStats::AssemblySampleStats
#number_of_forward_reads_aligned MiseqRunStats::ResequencingSampleStats
#number_of_reverse_reads_aligned MiseqRunStats::ResequencingSampleStats
#number_of_snps MiseqRunStats::ResequencingSampleStats
#parse_assembly_run_stats MiseqRunStats
#parse_resequencing_run_stats MiseqRunStats
#percentage_compared_to_raw FastqAssessment::FastqStats
#percentage_compared_to_raw FastqAssessment
#position_where_quality_lt_20 FastqAssessment::FastqStats
#read_position_stats FastqAssessment::FastqStats
#sample_name MiseqRunStats::AssemblySampleStats
#sample_name MiseqRunStats::ResequencingSampleStats
#sample_stats MiseqRunStats::AssemblyRunStats
#sample_stats MiseqRunStats::ResequencingRunStats
#sample_variance Enumerable
#standard_deviation Enumerable
#sum Enumerable
#third_quartile FastqAssessment::ReadPositionStats
#trim_and_correct_fastqs Top Level Namespace
#which Top Level Namespace
#write_out_fastq_trim_script Top Level Namespace