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#== Mascot::DAT::PSM
#[] Mascot::DAT::Parameters
#[] Mascot::DAT::SearchDatabases
#accession Mascot::DAT::Proteins::ProteinEntry
#boundary Mascot::DAT
#boundary_string Mascot::DAT
#byteoffset Mascot::DAT::Proteins
#byteoffset Mascot::DAT::Peptides
#cleavages Mascot::DAT::Enzyme
#close Mascot::DAT
#dat_file Mascot::DAT
#dat_file Mascot::DAT::Proteins
#decoy_peptides Mascot::DAT
#deltas Mascot::DAT::Masses
#desc Mascot::DAT::Proteins::ProteinEntry
#distribution Mascot::DAT::HeaderInfo
#each Mascot::DAT::Proteins
#each Mascot::DAT::SearchDatabases
#each Mascot::DAT::Peptides
#endbytepos Mascot::DAT::Peptides
#endbytepos Mascot::DAT::Proteins
#enzyme Mascot::DAT
#fixed_modifications Mascot::DAT::Masses
#goto Mascot::DAT
#idx Mascot::DAT
#idx Mascot::DAT::Proteins
#independent Mascot::DAT::Enzyme
#index_psm_positions Mascot::DAT::Peptides
#initialize Mascot::DAT::PSM
#initialize Mascot::DAT::HeaderInfo
#initialize Mascot::DAT::Parameters
#initialize Mascot::DAT::SearchDatabases
#initialize Mascot::DAT::Proteins
#initialize Mascot::DAT
#initialize Mascot::DAT::Enzyme
#initialize Mascot::DAT::Peptides
#initialize Mascot::DAT::Masses
#masses Mascot::DAT
#masstable Mascot::DAT::Masses
#method_missing Mascot::DAT::Parameters
#mr Mascot::DAT::Proteins::ProteinEntry
#names Mascot::DAT::Parameters
#next_entry Mascot::DAT::Proteins
#next_psm Mascot::DAT::Peptides
open Mascot::DAT
#parameters Mascot::DAT
#parameters Mascot::DAT::Parameters
parse Mascot::DAT::SearchDatabases
parse Mascot::DAT::PSM
#parse Mascot::DAT::SearchDatabases
#peptides Mascot::DAT
#protein Mascot::DAT::Proteins
#proteins Mascot::DAT
#psm Mascot::DAT::Peptides
#psmidx Mascot::DAT::Peptides
#query Mascot::DAT
#read_section Mascot::DAT
#restrictions Mascot::DAT::Enzyme
#rewind Mascot::DAT::Peptides
#rewind Mascot::DAT::Proteins
#search_databases Mascot::DAT
#search_databases Mascot::DAT::HeaderInfo
#semi_specific Mascot::DAT::Enzyme
#terminals Mascot::DAT::Enzyme
#title Mascot::DAT::Enzyme