Class List

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Top Level Namespace
MergeTop Level Namespace
MsTop Level Namespace
- IdentMs
  - PeptideMs::Ident
    Db < HashMs::Ident::Peptide
    IO < ObjectMs::Ident::Peptide::Db
  - PeptideHit < ObjectMs::Ident
    QvalueMs::Ident::PeptideHit
  - Pepxml < ObjectMs::Ident
    AminoacidModification < ObjectMs::Ident::Pepxml
    EnzymaticSearchConstraint < HashMs::Ident::Pepxml
    MsmsPipelineAnalysis < ObjectMs::Ident::Pepxml
    MsmsRunSummary < ObjectMs::Ident::Pepxml
    Parameters < HashMs::Ident::Pepxml
    SampleEnzyme < ObjectMs::Ident::Pepxml
    SearchDatabase < ObjectMs::Ident::Pepxml
    SearchHit < ObjectMs::Ident::Pepxml
    Simple < StructMs::Ident::Pepxml::SearchHit
    SearchResult < ObjectMs::Ident::Pepxml
    SearchSummary < ObjectMs::Ident::Pepxml
    SpectrumQuery < ObjectMs::Ident::Pepxml
    TerminalModification < ObjectMs::Ident::Pepxml
  - Protein < ObjectMs::Ident
  - ProteinGroup < ArrayMs::Ident
  - ProteinHit < ProteinMs::Ident
  - Search < ObjectMs::Ident
  - SearchGroupMs::Ident
Numeric < ObjectTop Level Namespace
ProphTop Level Namespace
- PepSummary < ObjectProph
  - Pep < SearchHitProph::PepSummary
  - Prot < ObjectProph::PepSummary
- Prot < ObjectProph
  - Pep < ObjectProph::Prot
- ProtGroup < ObjectProph
- ProtSummary < ObjectProph
  - Parser < ObjectProph::ProtSummary
SequestTop Level Namespace
- PepXML < ObjectSequest
  - MSMSRunSummary < ObjectSequest::PepXML
  - SearchHit < ObjectSequest::PepXML
SpecIDTop Level Namespace
- PepSpecID
- ProtSpecID