Method List

Classes Methods Files

Search:

#abbreviation Enzyme
#abbreviation AminoAcidModification
#access_mode CustomDataField
#accession ProteinAnnotation
#activation_type ScanEvent
#advanced ThermoMSF::Model::ProcessingNodeParameter
#amino_acid_id AminoAcid
#amino_acid_id AminoAcidModificationsAminoAcidNLs
#amino_acid_id AminoAcidModificationsAminoAcids
#amino_acid_modification_id AminoAcidModification
#amino_acid_modification_id PeptidesAminoAcidModifications
#amino_acid_modification_id AminoAcidModificationsAminoAcids
#amino_acid_modification_id AminoAcidModificationsAminoAcidNLs
#amino_acid_name AminoAcid
#annotation Peptide
#annotation_group_id AnnotationGroup
#annotation_type_id AnnotationType
#area ThermoMSF::Model::QuanResult
#average_mass AminoAcidModificationNeutralLoss
#average_mass AminoAcid
#category ThermoMSF::Model::ProcessingNodeParameter
#charge SpectrumHeader
#charge MassPeak
#chromatogram Chromatogram
#classification AminoAcidModificationsAminoAcids
#color_b AnnotationGroup
#color_g AnnotationGroup
#color_r AnnotationGroup
#comment SchemaInfo
#confidence_level Peptide
#confidence_level ThermoMSF::Model::FalseDiscoveryRate
#connection MSF
#coverage ProteinScore
#creating_processing_node_number SpectrumHeader
#data_purpose CustomDataField
#data_target CustomDataField
#data_type CustomDataField
#dataset_id AnnotationDataset
#dataset_id AnnotationGroup
#date SchemaInfo
#delta_average_mass AminoAcidModification
#delta_mass AminoAcidModification
#description AnnotationType
#description ProteinAnnotation
#description AnnotationGroup
#description AnnotationDataset
#description ProcessingNodeScore
#description_hash_code ProteinAnnotation
#display_name CustomDataField
#display_name AnnotationDataset
#end_peak_intensity ThermoMSF::Model::QuanResult
#end_peak_time ThermoMSF::Model::QuanResult
#end_time ThermoMSF::Model::QuanResult
#enzyme_id ThermoMSF::Model::EnzymeCleavageSpecificity
#enzyme_id Enzyme
#false_count ThermoMSF::Model::FalseDiscoveryRate
#fasta_file_id ThermoMSF::Model::FastaFileProteinAnnotation
#fasta_file_id FastaFile
#field_id CustomDataSpectrum
#field_id CustomDataPeptide
#field_id CustomDataProcessingNode
#field_id CustomDataField
#field_id CustomDataProtein
#field_value CustomDataProcessingNode
#field_value CustomDataProtein
#field_value CustomDataSpectrum
#field_value CustomDataPeptide
#file_basename FileInfo
#file_hash_code FastaFile
#file_id FileInfo
#file_id Chromatogram
#file_id MassPeak
#file_name FileInfo
#file_name FastaFile
#file_size FileInfo
#file_size FastaFile
#file_time FileInfo
#file_time FastaFile
#file_type FileInfo
#filter_module_number ThermoMSF::Model::ProcessingNodeFilterParameter
#filter_module_type_id ThermoMSF::Model::ProcessingNodeFilterParameter
#filter_parameter_name ThermoMSF::Model::ProcessingNodeFilterParameter
#filter_parameter_value ThermoMSF::Model::ProcessingNodeFilterParameter
#first_scan SpectrumHeader
#format CustomDataField
#format_string ProcessingNodeScore
#friendly_name ThermoMSF::Model::ProcessingNodeParameter
#friendly_name ProcessingNodeScore
#friendly_name ProcessingNode
#group_definition AnnotationGroup
#group_visibility CustomDataField
#guid AnnotationDataset
#guid CustomDataField
#height ReporterIonQuanResult
#height ThermoMSF::Model::QuanResult
#hidden FastaFile
#hidden Peptide
#hidden ProcessingNodeScore
#hidden ThermoMSF::Model::ProcessingNodeParameter
#hidden SpectrumHeader
#initialize MSF
#intended_purpose ThermoMSF::Model::ProcessingNodeParameter
#intensity MassPeak
#ionization ScanEvent
#is_active AminoAcidModification
#is_main_score ProcessingNodeScore
#is_master_protein Protein
#is_scheduled_for_deletion FastaFile
#is_srf_import FastaFile
#is_substitution AminoAcidModification
#is_valid WorkflowInfo
#isobar_sequence Peptide
isobaric_tags ProcessingNode
#kind SchemaInfo
#last_scan SpectrumHeader
#leaving_group AminoAcidModification
#left_node_index ThermoMSF::Model::TaxonomyNode
#machine_guid WorkflowInfo
#machine_name WorkflowInfo
#major_version ProcessingNode
#mass SpectrumHeader
#mass ReporterIonQuanResult
#mass MassPeak
#mass_analyzer ScanEvent
mass_for_one_letter_code AminoAcid
#mass_peak_id SpectrumHeader
#mass_peak_id MassPeak
#mass_peak_id ThermoMSF::Model::MassPeakRelation
masses AminoAcid
#matched_ions_count Peptide
#merge_similar_identification_results WorkflowInfo
#message WorkflowMessage
#message_id WorkflowMessage
#message_kind WorkflowMessage
#minor_version ProcessingNode
#missed_cleavages Peptide
#modification_name AminoAcidModification
#modified_sequence Peptide
#monoisotopic_mass AminoAcid
#monoisotopic_mass AminoAcidModificationNeutralLoss
#ms_level ScanEvent
#name AnnotationType
#name Enzyme
#name AminoAcidModificationNeutralLoss
#name AnnotationDataset
#name TaxonomyName
#name_category TaxonomyName
#neutral_loss_id AminoAcidModificationNeutralLoss
#neutral_loss_id AminoAcidModificationsAminoAcidNLs
#node_comment ProcessingNode
#node_guid ProcessingNode
#node_name ProcessingNode
#non_seperator Enzyme
#number_of_amino_acids FastaFile
#number_of_proteins FastaFile
#offset Enzyme
#one_letter_code AminoAcid
#parameter_name ThermoMSF::Model::ProcessingNodeParameter
#parameter_value ThermoMSF::Model::ProcessingNodeParameter
#parent_taxonomy_id ThermoMSF::Model::TaxonomyNode
#path MSF
#pc_data_release AnnotationDataVersion
#pc_data_version AnnotationDataVersion
#peptide_id PeptideScore
#peptide_id PeptidesAminoAcidModifications
#peptide_id PeptidesProteins
#peptide_id PeptideScoreDecoy
#peptide_id Peptide
#peptide_id CustomDataPeptide
#peptide_id PeptideTerminalModification
#physical_file_name FileInfo
#plot_type CustomDataField
#polarity ScanEvent
#position ThermoMSF::Model::ProcessingNodeParameter
#position AnnotationGroup
#position PeptidesAminoAcidModifications
#position_type AminoAcidModification
primary_key ProcessingNode
primary_key ProteinAnnotation
primary_key AnnotationType
primary_key CustomDataProcessingNode
primary_key SpectrumScore
primary_key SpectrumHeader
primary_key ReporterIonQuanResultsSearchSpectra
primary_key CustomDataProtein
primary_key AnnotationDataset
primary_key ProteinScore
primary_key PeptideScore
primary_key AminoAcidModificationsAminoAcidNLs
primary_key Chromatogram
primary_key TaxonomyName
primary_key ProcessingNodeScore
primary_key ProteinIdentificationGroup
primary_key ScanEvent
primary_key FastaFile
primary_key PeptideTerminalModification
primary_key AminoAcid
primary_key SchemaInfo
primary_key AminoAcidModificationsAminoAcids
primary_key MassPeak
primary_key FileInfo
primary_key AnnotationDataVersion
primary_key AminoAcidModification
primary_key AminoAcidModificationNeutralLoss
primary_key Spectrum
primary_key Protein
primary_key CustomDataSpectrum
primary_key Peptide
primary_key Enzyme
primary_key CustomDataPeptide
primary_key PeptidesAminoAcidModifications
primary_key PeptideScoreDecoy
primary_key AnnotationGroup
primary_key WorkflowMessage
primary_key CustomDataField
primary_key ReporterIonQuanResult
primary_keys PeptidesProteins
#processing_node_id ProcessingNode
#processing_node_id ProcessingNodeScore
#processing_node_id PeptideScoreDecoy
#processing_node_id PeptideScore
#processing_node_id ThermoMSF::Model::ProcessingNodeParameter
#processing_node_id WorkflowMessage
#processing_node_id ThermoMSF::Model::ProcessingNodeFilterParameter
#processing_node_number ReporterIonQuanResult
#processing_node_number ProcessingNode
#processing_node_number SpectrumScore
#processing_node_number ReporterIonQuanResultsSearchSpectra
#processing_node_number ProteinScore
#processing_node_number PeptideScore
#processing_node_number ThermoMSF::Model::ProcessingNodeParameter
#processing_node_number CustomDataProcessingNode
#processing_node_number PeptideTerminalModification
#processing_node_number ProteinIdentificationGroup
#processing_node_number PeptideScoreDecoy
#processing_node_number Peptide
#processing_node_number PeptidesProteins
#processing_node_number WorkflowMessage
#processing_node_number PeptidesAminoAcidModifications
#processing_node_number ThermoMSF::Model::FalseDiscoveryRate
#processing_node_number ThermoMSF::Model::ProcessingNodeFilterParameter
#processing_node_parent_number ProcessingNode
#processing_node_state ProcessingNode
#protein_annotation_id ThermoMSF::Model::FastaFileProteinAnnotation
#protein_annotation_id ProteinAnnotation
#protein_id ProteinAnnotation
#protein_id ProteinScore
#protein_id CustomDataProtein
#protein_id Protein
#protein_id PeptidesProteins
#protein_identification_group_id ProteinScore
#protein_identification_group_id ProteinIdentificationGroup
#protein_score ProteinScore
#purpose_details ThermoMSF::Model::ProcessingNodeParameter
#quan_channel_id ReporterIonQuanResult
#quan_result_id ThermoMSF::Model::QuanResult
#reconnect MSF
#related_mass_peak_id ThermoMSF::Model::MassPeakRelation
#retention_time SpectrumHeader
#right_node_index ThermoMSF::Model::TaxonomyNode
#scan_event_id ScanEvent
#scan_event_id SpectrumHeader
#scan_numbers SpectrumHeader
#scan_numbers MassPeak
#scan_type ScanEvent
#score SpectrumScore
#score_category ProcessingNodeScore
#score_guid ProcessingNodeScore
#score_id PeptideScore
#score_id ProcessingNodeScore
#score_id PeptideScoreDecoy
#score_name ProcessingNodeScore
#score_value PeptideScore
#score_value PeptideScoreDecoy
#search_engine_rank Peptide
#search_spectrum_id ReporterIonQuanResultsSearchSpectra
#sending_processing_node_number ThermoMSF::Model::ProcessingNodeSpectrum
#seperator Enzyme
#sequence Protein
#sequence Peptide
#sequence_hash_code Protein
#software_version SchemaInfo
#source_node_number CustomDataField
#specificity ThermoMSF::Model::EnzymeCleavageSpecificity
#spectrum Spectrum
#spectrum_hash_code Spectrum
#spectrum_id CustomDataSpectrum
#spectrum_id ThermoMSF::Model::ProcessingNodeSpectrum
#spectrum_id SpectrumScore
#spectrum_id SpectrumHeader
#spectrum_id ReporterIonQuanResult
#spectrum_id ReporterIonQuanResultsSearchSpectra
#spectrum_id ThermoMSF::Model::QuanResult
#spectrum_id Peptide
#start_peak_intensity ThermoMSF::Model::QuanResult
#start_peak_time ThermoMSF::Model::QuanResult
#start_time ThermoMSF::Model::QuanResult
#state FastaFile
#substitution AminoAcidModification
#sum_formula AminoAcid
table_name ProcessingNodeScore
table_name CustomDataSpectrum
table_name PeptideScoreDecoy
table_name CustomDataProtein
table_name CustomDataPeptide
table_name PeptidesAminoAcidModifications
table_name AnnotationDataset
table_name ProteinAnnotation
table_name PeptidesProteins
table_name CustomDataField
table_name WorkflowMessage
table_name AnnotationGroup
table_name AminoAcidModificationsAminoAcidNLs
table_name AminoAcidModificationsAminoAcids
table_name SpectrumHeader
table_name ProcessingNode
table_name AnnotationType
table_name SpectrumScore
table_name WorkflowInfo
table_name ProteinScore
table_name TaxonomyName
table_name PeptideScore
table_name Chromatogram
table_name SchemaInfo
table_name ScanEvent
table_name ProteinIdentificationGroup
table_name FastaFile
table_name AminoAcid
table_name AminoAcidModificationNeutralLoss
table_name MassPeak
table_name FileInfo
table_name Spectrum
table_name Protein
table_name Peptide
table_name Enzyme
table_name ReporterIonQuanResultsSearchSpectra
table_name CustomDataProcessingNode
table_name ReporterIonQuanResult
table_name AnnotationDataVersion
table_name AminoAcidModification
table_name PeptideTerminalModification
#target ThermoMSF::Model::FalseDiscoveryRate
#target_node_number CustomDataField
#taxonomy_id ProteinAnnotation
#taxonomy_id TaxonomyName
#taxonomy_id ThermoMSF::Model::TaxonomyNode
#taxonomy_rank ThermoMSF::Model::TaxonomyNode
#terminal_modification_id PeptideTerminalModification
#theoretical_mass Peptide
#three_letter_code AminoAcid
#time WorkflowMessage
#title SpectrumHeader
#total_ions_count Peptide
#trace_type Chromatogram
#true_count ThermoMSF::Model::FalseDiscoveryRate
#unimod_accession AminoAcidModification
#unique_peptide_sequence_id Peptide
#unique_spectrum_id SpectrumHeader
#unique_spectrum_id Spectrum
#user WorkflowInfo
#value_display_string ThermoMSF::Model::ProcessingNodeParameter
#version CustomDataField
#version WorkflowInfo
#version SchemaInfo
#virtual_file_name FastaFile
#visibility CustomDataField
#workflow_description WorkflowInfo
#workflow_guid WorkflowInfo
#workflow_name WorkflowInfo
#workflow_start_date WorkflowInfo
#workflow_state WorkflowInfo
#workflow_template WorkflowInfo