Method List
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#add_information EuPathDBGeneInformation
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#add_table EuPathDBGeneInformation
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#alternate_ids PositionedGeneWithOntology
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#annotation Bio::EuPathDB::FastaAnnotation
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#cds PositionedGene
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#cds_end PositionedGene
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#cds_start PositionedGene
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#database EuPathDBSpeciesData
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#description PositionedGeneWithOntology
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#directories_for_mkdir EuPathDBSpeciesData
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#distance_iterator JgiGenesGff
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download EuPathDBSpeciesData
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#each EuPathDBGeneInformationTable
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#each Bio::EuPathDB::FastaParser
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#eu_path_db_download_directory EuPathDBSpeciesData
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#eu_path_db_fasta_download_directory EuPathDBSpeciesData
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#eu_path_db_gff_download_directory EuPathDBSpeciesData
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#eu_path_db_txt_download_directory EuPathDBSpeciesData
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#exons PositionedGene
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#extract_gene_info EuPathDBGeneInformationFileExtractor
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#features_to_ignore EupathDBGFF
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#filename EuPathDBGeneInformationFileExtractor
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#gene_id Bio::EuPathDB::FastaAnnotation
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#gene_information_filename EuPathDBSpeciesData
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#gene_information_gzfile_filename EuPathDBSpeciesData
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#gene_information_gzfile_path EuPathDBSpeciesData
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#gene_information_path EuPathDBSpeciesData
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#genomic_fasta_filename EuPathDBSpeciesData
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#get_info EuPathDBGeneInformation
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#get_table EuPathDBGeneInformation
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#gff_filename EuPathDBSpeciesData
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#gff_path EuPathDBSpeciesData
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#go_identifiers PositionedGeneWithOntology
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#has_next_distance JgiGenesIterator
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#ignore_line? EupathDBGFF
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#ignore_record? EupathDBGFF
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#info EuPathDBGeneInformation
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#initialize EupathDBGFF
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#initialize JgiGenesIterator
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#initialize Bio::EuPathDB::FastaParser
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#initialize EuPathDBGeneInformationFileExtractor
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#initialize JgiGffRecord
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#initialize EuPathDBGeneInformationTable
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#initialize JgiGenesGff
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#initialize EuPathDBSpeciesData
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#local_download_directory EuPathDBSpeciesData
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#method_missing EuPathDBSpeciesData
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#name PositionedGene
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#next_distance JgiGenesIterator
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#next_entry Bio::EuPathDB::FastaParser
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#next_gene EuPathDBGeneInformationTable
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#next_gene JgiGenesIterator
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#next_gene EupathDBGFF
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#next_gene JgiGenesGff
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#one_word_name EuPathDBSpeciesData
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#parse_attributes EupathDBGFFRecord
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#parse_attributes JgiGffRecord
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#parse_mandatory_columns JgiGffRecord
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#parse_name Bio::EuPathDB::FastaParser
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#positive_strand? PositionedGene
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#protein_blast_database_path EuPathDBSpeciesData
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#protein_fasta_file_iterator EuPathDBSpeciesData
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#protein_fasta_filename EuPathDBSpeciesData
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#protein_fasta_path EuPathDBSpeciesData
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#protein_id PositionedGene
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#representative_strain_name EuPathDBSpeciesData
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#scaffold Bio::EuPathDB::FastaAnnotation
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#seqname PositionedGene
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#sequence Bio::EuPathDB::FastaAnnotation
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#sequencing_centre Bio::EuPathDB::FastaAnnotation
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species_data_from_database EuPathDBSpeciesData
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#species_name Bio::EuPathDB::FastaParser
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#start PositionedGene
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#strand PositionedGene
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#to_s JgiGffRecord
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#transcript_fasta_filename EuPathDBSpeciesData
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#transcript_fasta_path EuPathDBSpeciesData
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#version EuPathDBSpeciesData