Method List
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#== TreeClusters::Clade
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#add TreeClusters::Attrs
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#all_clades TreeClusters
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#all_leaves NewickNode
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#all_leaves TreeClusters::Clade
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#all_sibling_leaves TreeClusters::Clade
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#all_tags TreeClusters::Clade
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#attrs TreeClusters::Attrs
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#check_ids TreeClusters
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#clade_nodes NewickTree
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#consensus TreeClusters
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#each_sibling_leaf_set TreeClusters::Clade
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#eql? TreeClusters::Clade
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#initialize TreeClusters::Clade
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#intersection TreeClusters::AttrArray
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#left_leaves TreeClusters::Clade
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#low_ent_cols TreeClusters
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#low_ent_cols_with_bases TreeClusters
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#name TreeClusters::Clade
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#node TreeClusters::Clade
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#non_parent_leaves TreeClusters::Clade
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#other_leaves TreeClusters::Clade
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#parent_leaves TreeClusters::Clade
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#read_alignment TreeClusters
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#read_attrs_file TreeClusters
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#read_mapping_file TreeClusters
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#right_leaves TreeClusters::Clade
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#single_tag_info TreeClusters::Clade
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#snazzy_clades TreeClusters
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#snazzy_info TreeClusters
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#union TreeClusters::AttrArray
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#unquoted_taxa NewickTree