Class: Bio::FlatFileIndex::Flat_1::SecondaryNameSpace

Inherits:

Template::NameSpace

• Object
• Template::NameSpace
• Bio::FlatFileIndex::Flat_1::SecondaryNameSpace

Defined in:

lib/bio/io/flatfile/index.rb

Overview

secondary name space

Internal use only.

Instance Attribute Summary

Attributes inherited from Template::NameSpace

#dbname, #file, #name

Instance Method Summary

• #filename ⇒ Object
• #mapping(filename) ⇒ Object
• #search(key) ⇒ Object

Methods inherited from Template::NameSpace

#close, #include?, #initialize

Constructor Details

This class inherits a constructor from Bio::FlatFileIndex::Template::NameSpace

Instance Method Details

#filename ⇒ Object

# File 'lib/bio/io/flatfile/index.rb', line 1040

def filename
  File.join(dbname, "id_#{name}.index")
end

#mapping(filename) ⇒ Object

# File 'lib/bio/io/flatfile/index.rb', line 1037

def mapping(filename)
  FlatMappingFile.new(filename)
end

#search(key) ⇒ Object

# File 'lib/bio/io/flatfile/index.rb', line 1043

def search(key)
  r = super(key)
  file.close
  r.flatten!
  r
end