Class: Presenters::TubePresenter

Inherits:
Object
  • Object
show all
Includes:
CreationBehaviour, Presenter, RobotControlled, Statemachine::Shared
Defined in:
app/models/presenters/tube_presenter.rb

Overview

rubocop:todo Style/Documentation

Instance Method Summary collapse

Instance Method Details

#all_plate_states ⇒ Object Originally defined in module Statemachine::Shared

#barcode ⇒ String Originally defined in module Presenter

Formatted barcode string for display

Returns:

  • (String) —

    Barcode string. eg. DN1 12200000123

#child_plates ⇒ Object Also known as: child_assets 



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# File 'app/models/presenters/tube_presenter.rb', line 56

def child_plates
  labware.child_plates.tap { |child_plates| yield child_plates if block_given? && child_plates.present? }
end

#comment_title ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 40

def comment_title
  "#{human_barcode} - #{purpose_name}"
end

#compatible_plate_purposes ⇒ Object Originally defined in module CreationBehaviour

#compatible_tube_purposes ⇒ Object Originally defined in module CreationBehaviour

#control_state_change ⇒ Object Originally defined in module Statemachine::Shared

Yields to the block if there is the possibility of controlling the state change, passing the valid next states, along with the current one too.

#created_on ⇒ String Originally defined in module Presenter

Human formatted date of creation

Returns:

  • (String) —

    Human formatted date of creation

#csv_file_links ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 82

def csv_file_links
  purpose_config
    .fetch(:file_links, [])
    .map do |link|
      format_extension = link.format || 'csv'
      [
        link.name,
        [
          :limber_tube,
          :tubes_export,
          { id: link.id, limber_tube_id: human_barcode, format: format_extension, **link.params || {} }
        ]
      ]
    end
end

#custom_metadata_fields ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 44

def custom_metadata_fields
  purpose_config.fetch(:custom_metadata_fields, []).to_a.to_json
end

#default_label_count ⇒ Object Originally defined in module Presenter

#default_printer ⇒ Object Originally defined in module Presenter

#default_state_change {|default_transition| ... } ⇒ Object Originally defined in module Statemachine::Shared

Yields:

#default_transition ⇒ Object Originally defined in module Statemachine::Shared

#each_robot ⇒ Object Originally defined in module RobotControlled

#input_barcode ⇒ String Originally defined in module Presenter

Formatted stock plate barcode string for display

Returns:

  • (String) —

    Barcode string. eg. DN1 12200000123

#inspect ⇒ Object Originally defined in module Presenter

#label ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 26

def label
  # fetch label class from purpose if present
  label_class = purpose_config.fetch(:label_class) || 'Labels::TubeLabel'
  label_class.constantize.new(labware)
end

#printer_limit ⇒ Object Originally defined in module Presenter

#qc_summary ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 70

def qc_summary
  labware
    .receptacle
    .all_latest_qc
    .sort_by(&:key)
    .each { |result| yield result.key.titleize, result.unit_value.to_s }
end

#qc_summary? ⇒ Boolean

Returns:

  • (Boolean) 


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# File 'app/models/presenters/tube_presenter.rb', line 66

def qc_summary?
  labware.receptacle&.all_latest_qc&.to_a.present?
end

#robot? ⇒ Boolean Originally defined in module RobotControlled

Returns:

  • (Boolean)

#sample_count ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 32

def sample_count
  labware.aliquots.count
end

#sequencescape_submission {|s| ... } ⇒ Object

Yields:

  • (s) 


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# File 'app/models/presenters/tube_presenter.rb', line 48

def sequencescape_submission
  return nil if purpose_config.submission.empty?

  s = SequencescapeSubmission.new(purpose_config.submission.to_hash.merge(assets: [labware.uuid]))
  yield s if block_given?
  s
end

#state ⇒ Object Originally defined in module Statemachine::Shared

#state=(value) ⇒ Object Originally defined in module Statemachine::Shared

– We ignore the assignment of the state because that is the statemachine getting in before the plate has been loaded. ++

#suggest_library_passing? ⇒ Boolean Originally defined in module Presenter

Returns:

  • (Boolean)

#suggested_purposes ⇒ Object Originally defined in module CreationBehaviour

#summary ⇒ Object Originally defined in module Presenter

#tag_sequences ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 36

def tag_sequences
  labware.aliquots.map(&:tag_pair)
end

#title ⇒ Object Originally defined in module Presenter

#transfer_volumes? ⇒ Boolean

Returns:

  • (Boolean) 


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# File 'app/models/presenters/tube_presenter.rb', line 78

def transfer_volumes?
  !purpose_config[:transfer_parameters].nil?
end

#tubes_and_sources ⇒ Object 



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# File 'app/models/presenters/tube_presenter.rb', line 62

def tubes_and_sources
  labware.child_tubes.tap { |child_tubes| yield child_tubes if block_given? && child_tubes.present? }
end