Documentation for sanger/limber (develop)

Alphabetic Index

File Listing

Namespace Listing A-Z

ActiveRequestValidator (Validators)
Aliquot (Sequencescape::Api::V2)
AllowsLibraryPassing (Presenters::Statemachine)
Analyzer (Validators::StockStateValidator)
ApplicationController
ApplicationHelper
Asset (Sequencescape::Api::V2)
AssetSearchForm
AutomaticLabwareStateChanger (StateChangers)
AutomaticPlateStateChanger (StateChangers)
AutomaticTubeStateChanger (StateChangers)

BaitedPlate (LabwareCreators)
Baits (LabwareCreators::BaitedPlate)
BarcodeLabelsHelper
BarcodedAsset (Limber)
Base (Sequencescape::Api::V2)
Base (Labels)
Base (Robots::Bed)
Base (LabwareCreators)
Base (ConfigLoader)
Bed (Robots)
BedHelpers (RobotConfiguration)
BedOrCar (RobotConfiguration)
Binner (Utility::CommonDilutionCalculations)

CardinalBankStockTubePresenter (Presenters)
CardinalPoolsPlate (LabwareCreators)
Collection (Presenters::TubesWithSources)
ColourChanel (ColourConverter)
ColourConverter
CommonDilutionCalculations (Utility)
CommonFileHandling (LabwareCreators)
Compressor (Utility::CommonDilutionCalculations)
ConcentrationBinnedPlate (LabwareCreators)
ConcentrationBinnedPlatePresenter (Presenters)
ConcentrationBinningCalculator (Utility)
ConcentrationNormalisationCalculator (Utility)
ConcentrationNormalisedPlate (LabwareCreators)
ConfigLoader
CreationBehaviour (Presenters)
CreationController
CreationHelper
CreatorButton (LabwareCreators)
CsvFile (LabwareCreators::CustomPooledTubes)
CsvFile (LabwareCreators::PcrCyclesBinnedPlate)
CsvFile (LabwareCreators::PcrCyclesBinnedPlate)
CsvFileBase (LabwareCreators::PcrCyclesBinnedPlate)
CsvFileBase (LabwareCreators::CommonFileHandling)
CsvFileForDuplexSeq (LabwareCreators::PcrCyclesBinnedPlate)
CsvFileForTNanoSeq (LabwareCreators::PcrCyclesBinnedPlate)
CsvFileForTubeRack (LabwareCreators::CommonFileHandling)
CsvFileForTubeRackWithRackBarcode (LabwareCreators::CommonFileHandling)
CustomCreatorButton (LabwareCreators)
CustomMetadatumCollection (Sequencescape::Api::V2)
CustomPage (LabwareCreators)
CustomPooledTubes (LabwareCreators)
CustomTaggedPlate (LabwareCreators)

DefaultStateChanger (StateChangers)
Deployed
DeploymentInfo (ApplicationHelper)
DilutionsConfig (Utility)
DoesNotAllowLibraryPassing (Presenters::Statemachine)
DonorPoolingCalculator (LabwareCreators)
DonorPoolingPlate (LabwareCreators)
DonorPoolingValidator (LabwareCreators)

Export
ExportsController
ExportsHelper
ExportsLoader (ConfigLoader)
ExtendedCsv (Presenters)
Extensions (WellHelpers)

FailedValidator (Validators)
FinalTube (LabwareCreators)
FinalTubeFromPlate (LabwareCreators)
FinalTubePresenter (Presenters)
FixedNormalisationCalculator (Utility)
FixedNormalisedPlate (LabwareCreators)
FlashTruncation
Form
FragmentSize (Sequencescape::Api::V2::Request)

GenerateQcResults (LabwareCreators)

HasBarcode (Sequencescape::Api::V2::Shared)
HasPolyMetadata (Sequencescape::Api::V2::Shared)
HasPrimerPanel
HasPurpose (Sequencescape::Api::V2::Shared)
HasRequests (Sequencescape::Api::V2::Shared)
HasWorklineIdentifier (Sequencescape::Api::V2::Shared)
Header (LabwareCreators::CustomPooledTubes::CsvFile)
HealthController

InColumnThenColumns (Limber::TagLayoutTemplate)
InColumnThenRows (Limber::TagLayoutTemplate)
InColumns (Limber::TagLayoutTemplate)
InCombinatorialByRows (Limber::TagLayoutTemplate)
InInverseColumns (Limber::TagLayoutTemplate)
InInverseRows (Limber::TagLayoutTemplate)
InProgressValidator (Validators)
InRows (Limber::TagLayoutTemplate)
InputError (SearchController)
Invalid (Robots::Bed)

Labware (Sequencescape::Api::V2)
LabwareBarcode
LabwareController
LabwareCreators
LabwareHelper
LabwareMetadata
Location (PlateWalking::Walker)

MergedPlate (LabwareCreators)
MinimalPcrPlatePresenter (Presenters)
MinimalPlatePresenter (Presenters)
MinimalStockPlatePresenter (Presenters)
MultiPlatePool (LabwareCreators)
MultiStamp (LabwareCreators)
MultiStampLibrarySplitter (LabwareCreators)
MultiStampTubes (LabwareCreators)
MultiStampTubesUsingTubeRackScan (LabwareCreators)
MultiplexedLibraryTube (Limber)

NestedValidation
NestedValidator (NestedValidation)
NoCustomPage (LabwareCreators)
NormalisedBinnedPlate (LabwareCreators)
NormalisedBinnedPlatePresenter (Presenters)
NormalisedBinningCalculator (Utility)
NullPanel (HasPrimerPanel)

OngoingPlate
OngoingTube
Order (Sequencescape::Api::V2)

PageHelper
PartialStampedPlate (LabwareCreators)
PartialStampedPlateWithoutDilution (LabwareCreators)
PcrCyclesBinnedPlate (LabwareCreators)
PcrCyclesBinnedPlateBase (LabwareCreators)
PcrCyclesBinnedPlateForDuplexSeq (LabwareCreators)
PcrCyclesBinnedPlateForTNanoSeq (LabwareCreators)
PcrCyclesBinnedPlatePresenterBase (Presenters)
PcrCyclesBinnedPlateUsingRequestMetadataPresenter (Presenters)
PcrCyclesBinnedPlateUsingWellMetadataPresenter (Presenters)
PcrCyclesBinningCalculator (Utility)
PcrCyclesCsvFileUploadConfigBase (Utility)
PcrCyclesForDuplexSeqCsvFileUploadConfig (Utility)
PcrCyclesForTNanoSeqCsvFileUploadConfig (Utility)
PcrPresenter (Presenters)
Permissive (Presenters::Statemachine)
PermissivePresenter (Presenters)
Pipeline
PipelineList
PipelineWorkInProgressController
PipelinesController
PipelinesLoader (ConfigLoader)
Plate (PurposeConfig)
Plate (Limber)
Plate (Sequencescape::Api::V2)
Plate384SingleLabel (Labels)
PlateBarcodeHeader (LabwareCreators::PcrCyclesBinnedPlate::CsvFile)
PlateCreationController
PlateDoubleLabel (Labels)
PlateDoubleLabelQc (Labels)
PlateHelper
PlateLabel (Labels)
PlateLabelBase (Labels)
PlateLabelCellacaQc (Labels)
PlateLabelLbsn96Lysate (Labels)
PlateLabelLdsAlLib (Labels)
PlateLabelLtnAlLib (Labels)
PlateLabelXp (Labels)
PlateLabelXpBase (Labels)
PlateOnly (LabwareCreators::SupportParent)
PlatePresenter (Presenters)
PlatePurpose (Sequencescape::Api::V2)
PlateReadyForCustomPoolingOnly (LabwareCreators::SupportParent)
PlateReadyForPoolingOnly (LabwareCreators::SupportParent)
PlateSplit (Labels)
PlateSplitToTubeRacks (LabwareCreators)
PlateToTubeRacksBed (Robots::Bed)
PlateToTubeRacksRobot (Robots)
PlateWalking
PlateWithPrimerPanel (LabwareCreators)
PlateWithTemplate (LabwareCreators)
PlatesController
PolyMetadatum (Sequencescape::Api::V2)
Pool (Sequencescape::Api::V2::Plate)
Pool (Limber::Plate)
PooledTubesBase (LabwareCreators)
PooledTubesBySample (LabwareCreators)
PooledTubesBySubmission (LabwareCreators)
PooledTubesBySubmissionWithPhiX (LabwareCreators)
PooledTubesFromWholePlates (LabwareCreators)
PooledTubesFromWholeTubes (LabwareCreators)
PooledWellsBySampleInGroups (LabwareCreators)
Pooling (Robots::Bed)
PoolingAndSplitting (Robots::Bed)
PoolingAndSplittingRobot (Robots)
PoolingRobot (Robots)
PoolingsLoader (ConfigLoader)
Pools (Sequencescape::Api::V2::Plate)
Pools (Limber::Plate)
PreCapturePool (Sequencescape::Api::V2)
Presenter (Presenters)
Presenters
PrimerPanel (Sequencescape::Api::V2)
PrimerPanel (Limber::Plate)
PrintJob
PrintJobsController
Project (Sequencescape::Api::V2)
PsdFormatter
Purpose (Sequencescape::Api::V2)
PurposeConfig
PurposesLoader (ConfigLoader)

QcAssay (Sequencescape::Api::V2)
QcFile (Limber)
QcFilesController
QcResult (Sequencescape::Api::V2)
QcThresholdPresenter (Presenters)
Qcable (Limber)
QcableObject (LabwareCreators::TaggedPlate)
QcablePresenter (Presenters)
QuadrantRobot (Robots)
QuadrantSplitPlate (LabwareCreators)
QuadrantStamp (LabwareCreators)
QuadrantStampBase (LabwareCreators)
QuadrantStampPrimerPanel (LabwareCreators)

RackedTube (Sequencescape::Api::V2)
Receptacle (Sequencescape::Api::V2)
Register (RobotConfiguration)
RepeatedStateChangeError
RepoData (Deployed)
Report (Robots)
Request (Sequencescape::Api::V2)
RequestType (Sequencescape::Api::V2)
RequireWellsWithCollectedBy (LabwareCreators)
RequireWellsWithConcentrations (LabwareCreators)
ResourceInvalid (LabwareCreators)
Robot (Robots)
RobotConfiguration
RobotControlled (Presenters)
Robots
RobotsController
Row (TNanoSeq)
Row (DuplexSeq)
Row (LabwareCreators::CustomPooledTubes::CsvFile)
RowBase (CsvFile)
RowBase (LabwareCreators::PcrCyclesBinnedPlate::CsvFile)
RowForTubeRack (CsvFile)
RowForTubeRackWithRackBarcode (CsvFile)
RviCdnaXpPresenter (Presenters)

Sample (Sequencescape::Api::V2)
Sample (Limber)
SampleManifest (Sequencescape::Api::V2)
SampleMetadata (Sequencescape::Api::V2)
SearchController
SearchHelper
Sequencescape
SequencescapePaginator (Sequencescape::Api::V2::Base)
SequencescapeSubmission
SequencescapeSubmissionBehaviour
SequencescapeSubmissionsController
SessionHelper
SessionsController
Settings
Shared (Presenters::Statemachine)
Shared (Sequencescape::Api::V2)
Sibling
Simple (RobotConfiguration)
SimpleTubePresenter (Presenters)
SingleChildPermissive (Presenters::Statemachine)
SingleChildPermissivePresenter (Presenters)
SplitPresenter (Presenters)
Splitting (Robots::Bed)
SplittingRobot (Robots)
StampedPlate (LabwareCreators)
StampedPlateAddingRandomisedControls (LabwareCreators)
Standard (Presenters::Statemachine)
StandardPresenter (Presenters)
StateAllowsChildCreation (Presenters::Statemachine)
StateAllowsSingleChildCreation (Presenters::Statemachine)
StateChange (Sequencescape::Api::V2)
StateChangeError (StateChangers)
StateChangeless (Presenters)
StateChangers
StateDoesNotAllowChildCreation (Presenters::Statemachine)
StateTransitions (Presenters::Statemachine)
Statemachine (Presenters)
StockBehaviour (Presenters)
StockPlatePresenter (Presenters)
StockStateValidator (Validators)
Study (Sequencescape::Api::V2)
Submission (Sequencescape::Api::V2)
Submission (Presenters::Statemachine)
SubmissionFailure (LabwareCreators::PooledTubesFromWholeTubes)
SubmissionPlatePresenter (Presenters)
SuboptimalValidator (Validators)
Subpool (Sequencescape::Api::V2::Plate)
SupportParent (LabwareCreators)

Tag (Sequencescape::Api::V2)
TagCollection (LabwareCreators::Tagging)
TagGroup (Sequencescape::Api::V2)
TagGroupAdapterType (Sequencescape::Api::V2)
TagLayoutTemplate (Limber)
TagPlate384Presenter (Presenters)
TagPlatesController
TagWalker (Limber::TagLayoutTemplate)
TaggedPlate (LabwareCreators)
TaggedPlateBehaviour (LabwareCreators)
TaggedPlateOnly (LabwareCreators::SupportParent)
Tagging (LabwareCreators)
TenStamp (LabwareCreators)
Threshold (Presenters::QcThresholdPresenter)
TransferRequest (Sequencescape::Api::V2)
Tube (PurposeConfig)
Tube (Sequencescape::Api::V2)
Tube (Limber)
TubeAllowsLibraryPassing (Presenters::Statemachine)
TubeCreationController
TubeFromTube (LabwareCreators)
TubeLabel (Labels)
TubeLabelTractionCompatible (Labels)
TubeOnly (LabwareCreators::SupportParent)
TubePresenter (Presenters)
TubeProxy
TubeRack (PurposeConfig)
TubeRack (Sequencescape::Api::V2)
TubeRackCreationController
TubeRackLabel (Labels)
TubeRackPresenter (Presenters)
TubeRackWalking
TubeRackWrapper (Robots)
TubeRacksController
TubeStateChanger (StateChangers)
TubesController
TubesExportsController (Tubes)
TubesHelper
TubesWithSources (Presenters)

Uncreatable (LabwareCreators)
UnknownLabwareType (Presenters)
UnknownPlatePresenter (Presenters)
UnknownTubePresenter (Presenters)
Unsupported (Limber::TagLayoutTemplate)
UntaggedPlatePassingPresenter (Presenters)
User (Sequencescape::Api::V2)
User (Limber)
Utility

V2 (Sequencescape::Api)
VacTubePresenter (Presenters)
ValidatePairedTubesController (Tubes)
Validators

WalkCombinatorialSequential (Limber::TagLayoutTemplate)
WalkQuadrants (Limber::TagLayoutTemplate)
WalkWellsInPools (Limber::TagLayoutTemplate)
WalkWellsOfPlate (Limber::TagLayoutTemplate)
Walker (TubeRackWalking)
Walker (PlateWalking)
Well (Sequencescape::Api::V2)
Well (Limber)
WellDetailsHeader (TNanoSeq)
WellDetailsHeader (DuplexSeq)
WellDetailsHeaderBase (LabwareCreators::PcrCyclesBinnedPlate::CsvFile)
WellFailingPresenter (PlateHelper)
WellFilter (LabwareCreators)
WellFilterAllowingPartials (LabwareCreators)
WellHelpers
WellRequest (Sequencescape::Api::V2::Plate::Subpool)
WorkCompletionBehaviour
WorkCompletionsController (Tubes)
WorkCompletionsController (Plates)