Method List
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RandomFloat RThelper
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#abu String
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#c_num PepCharges
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#c_term PepCharges
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#calcSpectrum MS::Peptide
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#calc_PI Top Level Namespace
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#cent_id MS::Sim_Feature
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#charge_at_pH Top Level Namespace
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#countAtoms MS::Peptide
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#create_digested MS::Sim_Digester
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#d_num PepCharges
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#digest MS::Sim_Digester
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#distribution_from_charge Top Level Namespace
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#e_num PepCharges
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#finish! Progress
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#fit GenCurvefit
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#fitness GenCurvefit
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#function GenCurvefit
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gaussian RThelper
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generateRT MS::Rtgenerator
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#generations GenCurvefit
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#get MS::Troll
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#getInts MS::Sim_Feature
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get_data Mzml_reader
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#get_mods Modifications
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get_parameters CurveFit
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#h_num PepCharges
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#hydrophobic_num PepCharges
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#identify_potential_charges Top Level Namespace
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#init_population GenCurvefit
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#initialize MS::Sim_Spectra
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#initialize MS::Peptide
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#initialize Modifications
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#initialize MS::Sim_Feature
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#initialize Progress
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#initialize GenCurvefit
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#initialize Mzml_Wrapper
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#initialize MS::Troll
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#initialize MS::Sim_Digester
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int_value Merger
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#k_num PepCharges
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make_int_arff MS::Weka
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make_rt_arff MS::Weka
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#max_mz MS::Sim_Feature
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#max_mz MS::Sim_Spectra
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#mean Enumerable
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merge Merger
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#modifications Modifications
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#mutate GenCurvefit
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#mutation_limits GenCurvefit
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mz_value Merger
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#n_term PepCharges
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#noiseify MS::Sim_Spectra
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noiseify MS::Noise
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normalize GenCurvefit
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normalized_gaussian RThelper
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#out Top Level Namespace
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#paramsize GenCurvefit
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#pi PepCharges
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plot Fit_plot
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#plot GenCurvefit
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#polar_num PepCharges
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#popsize GenCurvefit
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#population GenCurvefit
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predict_ints MS::Weka
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predict_rts MS::Weka
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#progress Progress
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#prot_id String
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#putsv Top Level Namespace
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#r_num PepCharges
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r_times MS::Sim_Spectra
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#random_float GenCurvefit
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#rmsd GenCurvefit
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#sample_variance Enumerable
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#seq PepCharges
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#set_fit_function GenCurvefit
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smoothave GenCurvefit
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#sort_by_fitness GenCurvefit
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spec_drops MS::Noise
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#standard_deviation Enumerable
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#sum Enumerable
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#to_xml Mzml_Wrapper
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#u_num PepCharges
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w_avg Merger
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write MS::Txml_file_writer
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write MS::Tcsv_file_writer
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#y_num PepCharges